KEGG   Pieris napi (green-veined white): 125052338
Entry
125052338         CDS       T08706                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pnap  Pieris napi (green-veined white)
Pathway
pnap03420  Nucleotide excision repair
pnap03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pnap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    125052338
   03460 Fanconi anemia pathway
    125052338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnap03032]
    125052338
   03400 DNA repair and recombination proteins [BR:pnap03400]
    125052338
DNA replication proteins [BR:pnap03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    125052338
DNA repair and recombination proteins [BR:pnap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125052338
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 125052338
NCBI-ProteinID: XP_047509074
LinkDB
Position
9:complement(4903263..4915105)
AA seq 862 aa
MDDCDGEYAAIETKYPLLSFEKQIFTDTFEKDALLILAKGLNYNNIISNILWVYKNPANL
VLVLNGNEHEEKYFSENFKISPLPNTGTEREKAYLEGGLFLASTRILVVDLLKNRVPVKH
ITGIIVLRAHTVLESCQEAFVLRLFRQNNKTGFIKAFSNSPISFTFGYNHVEKVMRALFV
TELFLWPRFHGNIIKCLKSRQAQVEELHVPLTPNMNNIQSCLLDIMNYTVKQLKSINKNI
NLQEITTENCITKKFHKILQSQLDCVWHQLSTRTKEYIQDLKILRTMIINLIHDDAVSFY
ALLSKYRTPEYAQVNSGWILLDSAEHLFRLARGRVYNSKNEFDPELAPKWQCLSDLLIKE
IPDEVKKKNESLNSTKVLILCLDNKTCSQLNHFLTMGANKYLFYTAFRRDLTINAVSSKY
KNFNDDISQLSGENPESEAEFNKSNYVLTQVTQPIDKEDSMFEPITEIENLDLTQIEKDK
PIICIQTFKQNGNHLSLEQTLEALRPEYIILYHSDVAAVRQIELFEARKKSEEAMSKVYF
LIHDKTVEEQSYLTALRREKQAFELLIQTKSIMVVPSYQDGKTDEYFNLNVEESETTNDT
RKAGGQNQVKEKPVVIVDMREFRSDLPSLLHKRGINIEPVTITIGDYILTPEICVERKSI
SDLIGSLNSGRLYTQCTHMCRAYTRPILLIEFDQNKPFNLQGSFVVSSDLSGADIQQKLQ
LLTIHFPRLKLVWSPSPYATAELFYELKQGRKNPNVEEAIALSGENSIDDICYERYNALI
HDFVHKLPGVTSKNITRIMNRGISLDHLITLSQESLYNILENKKEAEMLYSILHIKAKPS
DSKKDEKAFGKRKFGGKVFNKK
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggatgactgtgatggagaatacgctgctatagaaactaaatatccattgttatctttt
gaaaaacaaatatttactgatacatttgaaaaggatgctcttttgatacttgctaaagga
cttaattataataatattatttcaaatatcctttgggtttataaaaacccggctaacctt
gttttggtcttgaatggtaatgaacatgaagagaagtacttttctgaaaactttaaaata
tcaccattacctaatactggaacagaaagagagaaagcatatttggaaggaggcttattc
ttagcatccacaagaatactagtagtggacttattaaagaaccgtgtgcctgtgaaacat
ataacaggaattattgtattacgagcacacacagtgcttgaatcctgccaagaagcattt
gttttgaggctttttcgacaaaataataagactggttttataaaagcattttcaaattca
ccaatatcatttacatttgggtacaaccatgtagagaaggtgatgagagccttatttgtt
acggaattattcctttggcctagatttcatggaaatataataaagtgcctaaaaagcaga
caggcccaagttgaagaacttcatgtgcctctcacacccaatatgaacaacatacagtcc
tgcttactggacattatgaactatactgttaaacagctcaagagcatcaataaaaatata
aatttgcaggaaataacaacggagaactgtatcacaaagaaattccataaaattctacaa
tcacagctggactgtgtgtggcatcagctcagtacacgaactaaggagtacatacaggat
ctgaagattttacgaactatgattattaatttaatacatgatgacgcagtatcgttctat
gcgttattgagcaaatacaggactcctgagtatgcccaagtcaattcgggatggatactt
ctagactccgccgaacatttgtttcgattggcaagaggacgggtgtacaattctaaaaat
gaattcgacccggaacttgcaccgaaatggcaatgtttgagcgatttattaataaaagaa
atacccgatgaagttaaaaagaaaaacgaatcattaaacagcacaaaagtgctaatactt
tgtctcgataataaaacatgctctcagctaaatcattttttaactatgggcgcgaataaa
tatctattttatacggcttttcgacgggatttgactataaatgctgtatcttcgaagtat
aaaaatttcaatgatgacatttcccaactgagtggagaaaatcctgagagtgaagcagag
tttaataagtcgaattatgtgttgacccaagttactcagcctatagacaaagaagacagt
atgtttgaaccaatcactgagatcgaaaacctagatttaacgcaaatagaaaaagataaa
ccaattatatgcatacaaacattcaaacagaacggaaatcatctatcacttgaacagact
ctagaggctttacgaccggaatacataattctgtatcacagcgacgtggccgctgtacga
cagattgaattgttcgaagccaggaagaagtcagaggaagccatgtctaaagtgtatttt
cttatacacgataaaactgtggaagaacagtcgtatctcacggcattaaggcgagagaaa
caggccttcgagttgttgatacagactaaaagtataatggtggtaccctcttatcaagac
ggtaaaactgatgaatattttaatctgaatgtcgaagaaagtgaaactacaaatgatact
agaaaagccggtggacaaaatcaagttaaagaaaagccagtagtaatagtggatatgcga
gaatttcgctcggatctaccctcattacttcataaaagaggaataaacatcgagcctgtt
actataacaattggtgattatattctaacaccagagatatgcgtagagcgaaaatctata
tcggatctaattggttcactcaactccggtcgtttgtatacgcagtgtacgcatatgtgt
cgtgcgtatacgcgacccatattgctcatcgaattcgatcaaaataagccgtttaattta
cagggtagtttcgtagtgtcctctgacctgtctggcgcagacatacagcagaaacttcaa
cttctcactattcattttccgcggctaaaactcgtctggtcacccagcccatacgccacg
gccgagttgttttatgaacttaagcaaggaagaaaaaacccaaacgtagaagaggccata
gcattaagcggtgaaaattccattgacgatatttgctacgaaagatataacgccttaatc
catgacttcgttcacaaattacctggtgtcacttccaagaacattacgaggattatgaat
aggggcatctctcttgatcatcttattacgttgtcgcaggaaagtctttacaatattttg
gaaaataaaaaagaagccgaaatgttgtattccattctacacataaaagctaaaccgtca
gactcaaagaaggacgaaaaagcattcggaaaaagaaaatttggagggaaagtcttcaat
aaaaaataa

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