Pieris napi (green-veined white): 125052836
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Entry
125052836 CDS
T08706
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pnap
Pieris napi (green-veined white)
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnap04121
]
125052836
Ubiquitin system [BR:
pnap04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125052836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
125052836
NCBI-ProteinID:
XP_047509809
LinkDB
All DBs
Position
10:4246210..4278767
Genome browser
AA seq
1614 aa
AA seq
DB search
MRIKMAGTSNNNGKAGRSAVPVDVGSPLLDWEEGDHFSFEDSERFEEDSMCSWSSEPESL
CNNWRGWRRPNFPNSFGPRPTKKPTQDKPVSSLSELAAKCVASHIPFELVEHVYPPVPEQ
LQLQIAFWSFPESEDDIRLYSCLANGSAEEFQRGEHLFRDKAVKDVLQIGFHLSATVLLT
MARTQFNVAVTFDRQKISSCNCTCSSSAHWCSHIVAVCLFRIHLPTQVCLRAPVSESLQR
LQRDQLQKFAQYLISELPRQILPTAQKILDELLSAQPNQINTTCGAPDPTAGASAYEYTS
WFLDEKTLHNNINKILVKFCVPTPIVFSDVNYLSTSAPPAAAEWSSLLRPLRGREPEGMW
NLLSIVREMFKRSDRNAIPLLEIITEEVMACEQIIVWWYSTKAALVAWGGGTGGKHGGGG
GNSTAQHACSSLCDEVVVLWRLAALNPGLAPHERDTLHEQFTQWHVKVLDKVAKNRNNHI
NTSHPRHVRAHSHPPYINGISETEVFPGFNPAMEACFLEWDDYPIAGVTYTKDLNPLYHS
PFTIFRHSDKQADSVHQVNSSKAVLNNEMSLSYRLTNPDPSMQGHRTLVHRNSRITVDLA
IAGPSNQACGSGQEAARDPGPSDGNHSSVSSEGFCENEEEMQVSGADGGDTDSQDSSPPI
SSDDAIPPRDDSVSDDECQLYFYDATAARRVAADGSSAINGTNSVGGASSSGASWQCGWE
VQFARAEGLHAHGHAREACALGASLARELLARPPALLGTGYSGSAAELRRARRRHAPSPR
LCAASHRTSCLASTTLAKCAFLCTVLAEFSEQHELAFRVGLFALEMARPPASTKALEVKL
NNQESELVALLKKLPTGAEQLDLAREKAEQLRDGLLRSRGPALLPISLASFLFEVLVLSA
SENKHPARLLTDELLGFEAAVAALGLKANVSEADHPLLCEGTRRQRGDLAVTLLSFYKDD
PVKLARIMNKLLDRDIHQLTKGPMVSMYYSTNPRFNTRSEHHHHHPPANMPVAGPSCNLS
GEMERLSVGEGNGSPPTVPHSHQTHTTHTLPRLKDTRYKGKRQYPSVPNQPSEASSHFMF
ELAKSVLFKAGGSSSTSLFTQTSCAREHHGPHRGLHMAAFQLGLYALGLHNCVSANWLSR
TYSSHVSWITGQAMDIGAPAILFLIDAWEGHLTPPEAAGIADKASSGRDVQTVRAAAELA
LSVLPHAHALNYNEIQRAVLQCKEQSDAMLERACLIVEAAAKGACAGGGVYPEVLYTVAR
YWHELYLRQANEEEPEEAYRAPPPLAVPLPYPLPYPFTYHPYPPHIYRLQFECPQYGGAG
PAHPGAQFAIPQYFVRGIVPPHAPHPQQHPQMAQVAQVAQHVPMQPHAPPHQPIPVNVTH
PAPIPPPLPVAHQPVGAVGVVPVSTAHVNNGPPMGSVPQVPGAGPPALPQAQLRRLLAAY
RVGMLALETQARRVHDDRPQNKFGRNPPYGDHVKWLLRISKRLGAQYLHQFCVCAVNSVV
SPFVLYELCVESAHWLARGGPHHLVMQHLRGTLAPLVHKCQQMYIQCIHQKLYHLTAVEY
EEFVGIVLSARTAFQLTPEGNTQFKEWLASLRRSKSCKKDLWTQLNAALQTNGK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgcgtataaaaatggcggggacatcaaataataatgggaaagcgggacgatcagctgtc
ccagtggatgtgggatcgcccttacttgattgggaggagggagatcacttcagttttgaa
gattccgaacgtttcgaagaagattctatgtgtagctggagttcggaacccgaaagcctg
tgtaataattggcgaggctggagaagaccaaattttcccaattcattcggacctcggcca
acgaaaaaaccaactcaagacaaaccagtatcatcactaagtgagttggctgctaagtgt
gtcgccagtcacattccatttgagttagttgaacatgtgtatccaccagtaccagagcaa
ttacaactacaaattgcgttttggagcttcccagagagtgaagatgatatacgtctttat
tcatgtcttgcaaatggatcagctgaagaatttcagagaggagaacacctgtttagagac
aaagcggttaaagatgttttacaaattggttttcacttatctgcaacagttttacttacc
atggcaaggactcagtttaatgtagctgtgacatttgacaggcaaaagatatcatcatgt
aactgtacttgttcctcatcagctcattggtgttcacatattgttgctgtgtgtctcttt
agaatacatttaccaactcaagtatgtctcagagcaccggtatcagagtctctacagaga
ttgcagcgagatcaattacagaaatttgcacaatacctcatatccgagttaccacgacaa
attcttccaacggctcagaaaatattggacgagttattatcagctcaaccgaaccaaatt
aacacaacttgcggggctcctgacccaaccgcaggtgcatcggcctatgaatacacatca
tggttcctcgatgagaaaacattacacaacaatattaataaaatattggtgaaattttgt
gtaccaactccaattgtgtttagtgacgtaaattatctaagtacaagcgctccgccggcc
gcggctgagtggtcgtccttgttgcggcctttgcgcggacgtgagcctgaaggcatgtgg
aatttgctgtccattgtccgggagatgttcaaacgtagcgaccgaaatgctatacctcta
ctcgagataatcactgaagaggtcatggcttgtgaacagataatagtctggtggtacagc
actaaagcggccttagtggcgtggggtggcggtacgggagggaagcatggtggtggcggg
ggcaactccaccgctcagcacgcttgttcttctctgtgtgacgaggtggtggtgttatgg
cgtctcgcggctttgaaccctggactcgcaccacacgaaagagatacgcttcatgagcag
ttcactcaatggcacgtgaaggttttggacaaggtggcaaagaatcgaaacaatcacata
aatacgtcgcatccgcgccatgtgcgtgcgcattctcacccgccatacatcaacggtata
agcgagacagaagtatttcccggcttcaacccggcaatggaagcctgtttccttgaatgg
gacgactacccaatagctggtgttacatacacaaaggaccttaatccgctctaccatagt
ccttttactatattcaggcattcggataagcaggcagacagtgttcatcaggtaaattca
tcaaaggcagtacttaacaacgagatgtctctcagctataggctgacgaatcctgatccc
tcaatgcaaggacatcgcactctggttcacagaaacagtagaataactgttgatttggcg
attgctggtccttcgaaccaggcttgtggttctggccaggaagcagctcgtgatcccgga
ccaagtgacgggaatcattcgagtgtctcatctgaaggtttttgtgaaaatgaagaagaa
atgcaagttagcggcgcagatggtggtgatacagactctcaggattcatctccaccgatt
tcgtctgatgatgcaattccacccagggatgactccgtctctgatgatgaatgtcaactg
tacttctatgatgctacagctgctagaagagtggcagctgacggatcaagcgcaataaac
gggaccaacagtgtgggtggagccagtagcagcggcgctagttggcagtgcggttgggaa
gttcagttcgcgcgagcggaaggcttacacgcgcatgggcatgccagagaggcctgcgca
cttggcgctagtcttgccagagagctattggctagaccaccagccttgctaggtacaggc
tacagcggcagtgcagcggagttgcgtcgtgctcgtagacgtcacgcaccgtccccgcgt
ctctgcgcagccagccatcgcacctcgtgtctagcttcgaccacgcttgctaaatgcgct
ttcctttgcactgttctggcggaattcagcgaacaacacgaattagcattccgtgtgggt
cttttcgcgttggaaatggctcgtcctccagccagtactaaagctctggaagtgaagctg
aacaatcaggaatctgagctggtcgccttgctgaagaaactgccgactggtgcagagcaa
ctggatctggctagggagaaggcggaacaactgagagatggattgctaagaagcagaggt
cctgcattgttgccgatatcattggccagtttcttgtttgaagttcttgtgctgtccgcg
tctgagaacaaacatccagcaagactgctaacagacgaattactaggcttcgaagcggct
gtggcagccctaggcctcaaagcgaacgtgtcggaagcagatcatcccttactatgcgaa
ggcacgagacgacagcgcggtgacctagccgtgacccttctgtctttctacaaggacgat
cccgttaaactcgcccggattatgaataagctccttgaccgcgatatccaccagctgaca
aagggtccaatggtcagcatgtattactccacgaaccctcgcttcaatactcgcagcgag
catcaccaccatcatcctccagctaatatgcctgtggccggtccatcgtgtaacctctct
ggtgagatggagcgtctctcagtgggagaagggaatggctctccccccacagtcccccat
tcacatcagacgcatactacacataccttgcctaggcttaaggataccagatacaaagga
aagcgacaatatccctcagtgccaaatcagccttcggaggcgtcgtctcactttatgttc
gaattggccaagtcagtgttattcaaggctggaggatcctcaagtaccagcctcttcacc
cagacctcgtgtgccagagaacatcatggacctcatagaggtttacatatggcggctttc
caactcggtctatacgcgctcggcctacataactgtgttagcgccaattggctcagtcgt
acgtattcttcacatgtgagctggataacaggtcaagccatggatattggtgcacctgca
attctattcttgatcgatgcttgggaaggacatttaacaccgcctgaagcagctggaata
gctgataaggcctcatcgggtcgcgacgtccaaacagttcgggcggcggctgagctggcc
ttatcggtactaccgcacgcacacgccctcaactacaacgagatacaacgcgcagtactg
cagtgcaaggaacagagcgacgccatgttggaacgggcttgtctcatcgtcgaagccgct
gctaaaggcgcctgcgcaggtggcggggtttaccccgaggtgctgtacacagtggcccgt
tactggcacgagctgtacctgcgacaagccaacgaggaagagcccgaggaggcctacagg
gctccacccccgctcgccgtgcctctgccctacccgctgccatatcccttcacctaccac
ccctatccgccacacatctaccgactgcagttcgagtgccctcagtacggtggcgcaggt
ccggctcacccgggcgcccagttcgcgattccgcagtacttcgtgcgcgggatagtgccg
cctcacgcaccacatccgcagcagcacccgcagatggctcaagtggcgcaggtggcccag
cacgtcccaatgcagccccacgcgcctccacaccagcctatacccgtcaatgtgactcac
cccgctccgataccgccgcctttgcctgtcgcccatcaaccagtgggtgccgtgggagtt
gtgccagtcagtactgcacacgtgaataacggtccgcccatgggcagtgtcccacaagta
cctggcgctggtccacccgccttaccccaagcgcagttaaggagattactcgctgcttat
agagttggaatgcttgcactggaaacccaagccaggagggtccacgatgataggccgcag
aataagttcggaaggaatcccccatacggcgatcatgtgaaatggcttctgcgtatatcg
aaacgtctaggtgcgcaatacttacaccagttctgcgtttgcgcagttaactctgtggtt
tcaccgttcgtgctatacgagttatgcgttgagtcagcccattggctggctaggggaggc
cctcatcacctcgtgatgcagcatctacggggcacactagcgccactcgtgcacaagtgt
cagcagatgtacattcaatgcatccatcagaagctataccacttaacagcagtcgagtac
gaggagtttgttggtatcgtgttatcagcgcgtacggcttttcagctcacacctgaagga
aacacccagtttaaggaatggctggcttcactacgcagatcgaaatcgtgcaagaaggac
ttgtggacgcagctgaacgccgcgcttcagacgaacggcaaatga
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integrated database retrieval system
