Pieris napi (green-veined white): 125053730
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Entry
125053730 CDS
T08706
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125053730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125053730
03036 Chromosome and associated proteins [BR:
pnap03036
]
125053730
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125053730
Chromosome and associated proteins [BR:
pnap03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125053730
PBAF complex
125053730
GBAF(ncBAF) complex
125053730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
TMEM51
Motif
Other DBs
NCBI-GeneID:
125053730
NCBI-ProteinID:
XP_047511204
LinkDB
All DBs
Position
11:complement(8299521..8321337)
Genome browser
AA seq
950 aa
AA seq
DB search
MTTLGPKKDGGPNVDFFQSSECLTQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQ
YQENKLGKNAADPPFLRLPMKVFMDMKPGGSLCTVLSTMFRFKSEQRWRKFDFQVGKNPS
RKDLNVQMMMEIESALLTAEVIRSPCIYIRPEVDKATANKVKDIISNHQVEICDDEEDAT
HIIYPAVDPLEEEYARPVFRKGNHVLVHWYYFPDSHDTWAQADLPVDVPETANWDCNRSE
PYRVSATWVLDVPHYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIAGGEPSSKSKKGKRK
RSPSPPPQKHSKRKSRGAKKRENDVDEEEDNASRDNTDVTPAPEVERQPEPTPATTSTAA
ASSQEPAASTSEAPTTPAPAIEHDDSQGKHSDSNTQETIIKEEMEDNVTDQTHHIVVPSY
SAWFDYNSIHTIEKRALQEFFNAKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRN
LAGDVCAIMRVHGFLEQWGLINYQVEADVRPTAMGPPPTSHFHVLSDTPSGLQPLQPRPT
QPIQRPGILENAAVPKVEAGLPNGTEAGAPIKSEPSVKIEPTIEQISSAPGLKMDQYRGG
TRGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEDPYLNDSGVL
GPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATKAAMDEFAAIKDEVPAAMMEAHV
RAAGALGPQAALASTGIAGTAPENPPEKKEGSEIKAEPMEVEGEASGEGKVKEEAEAAPP
AEEKEIKEEETPPAQDPPAAVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVE
TQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARNHAIQR
LQAETGGAPVGVPVPGVVPGVPGVPGVTVGPPPTETGHEPPHQPAPHHHP
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgactactttgggtcctaagaaggatgggggtcctaatgttgacttctttcaatcatcg
gaatgcctaacacagttcgatcagattcgtgtgtggttgcaaaagaactgcaaaaagcat
gttcaaactgacccaccaaccaaagaaggcttagcacaacttgttattcaactaattcaa
taccaagaaaataaacttggtaaaaatgctgcagatccacctttcctgaggcttccgatg
aaagtgttcatggacatgaagccgggtggctcgctgtgcacagtgctatccaccatgttc
cgcttcaagtcggagcagcggtggcgcaagttcgacttccaggtcggtaagaacccgtct
cggaaagacctgaacgttcagatgatgatggaaatagagtcagctcttctgaccgctgaa
gtcatccgttcaccatgtatctacatacgtcccgaagtcgataaggctactgcgaataaa
gttaaggatatcattagcaatcatcaagttgaaatatgcgatgacgaagaagacgcgacc
cacataatatatccagcagttgacccgctggaagaagaatatgcaaggccggtcttcaga
aaaggtaaccatgtcctcgtccactggtactacttcccggacagtcatgatacgtgggct
caagctgatttaccggtagatgttccagaaacagctaattgggattgcaataggtcagag
ccttaccgtgtgtccgccacctgggtgctggatgtccctcattataacgaatggatgaat
gaagaggactatgaagttgatgctaacggaaagaagaaggtgcacaaacttcgtctctca
gtagacgacctgattgcgggcggtgaaccgtcatcaaagagcaaaaagggaaagaggaaa
cgctcgccgtccccacctcctcagaaacacagcaaaaggaagagtcgtggagccaaaaaa
cgagaaaatgatgttgacgaagaggaggacaacgcatcaagggacaacactgatgttact
cccgcacctgaagtagaaagacaacctgaaccaactccagctacaacctcaacggcggct
gcatcatcacaagaacctgctgcttccacctccgaagctcccactactcctgcacccgct
atagagcacgacgattcgcaggggaaacacagcgattctaacacacaggaaacaataata
aaagaagaaatggaagataacgttacagaccagactcaccatatagtcgtgccctcgtat
tccgcgtggttcgactacaactctatacacacgatagagaaacgcgctctgcaagagttc
tttaacgccaagaataaatctaagacgcccgaaatctatctcgcgtacagaaacttcatg
atcgacacctaccgcctgaatcccacagaatatctcacgagtacggcctgtagacgtaat
ctagcgggagacgtgtgcgcaataatgcgagtacacggcttcttagagcaatggggactt
attaattaccaagtggaggccgatgtacgtcccacagccatgggaccacctccgacatct
cacttccatgtgttatcggatacgccatctggattgcagccattgcagcccagacccact
cagcctatacagcggccgggtatcttagaaaatgcagcagtgccgaaagtggaagcaggt
cttcccaacggaacggaagcaggtgcgcccattaaaagtgaaccctcggtcaagattgag
ccaaccattgaacagatttcgtctgcgccgggactcaaaatggaccagtatcgtggcgga
actcgaggtcgagaatggacagaacaagaaaccttacttcttttggaagcgttggaactc
caccgggatgattggaaccgggttgcagctcacgttggaaccaggactcatgatgagtgt
attctacactttttaaggctgccgatcgaggacccatacctcaacgacagtggagttctg
ggtcctctcgcctaccaaccaatcccattcagcaaaaccggaaatccggtaatgagcacc
gtggccttccttgcatctgtggtcgacccacgcattgcttccaaggccactaaggctgct
atggacgagtttgctgctatcaaggacgaagtaccagcagccatgatggaggcccacgtg
cgagccgcaggtgccctaggccctcaggctgcgctcgcgagtactggcatcgctggcact
gcgcctgaaaatccacctgaaaagaaggaaggtagcgaaataaaagctgagccaatggaa
gtggaaggagaggcaagtggagaaggaaaggttaaggaagaagcagaggcagcgccaccg
gcagaagaaaaggagatcaaggaagaagagacaccgcctgcgcaggacccaccagcagcg
gtagacgcgaaattgcaatccgctgcggctgcagcacttgcggctgcggcggttaaggcg
aaacatctcgcgggcgtcgaagagcggaagatcaagtcacttgtggctcttctggtggag
acgcagatgaagaagttggagataaagttgcgacacttcgaagagctggaggcgactatg
gagcgggaaagagaaggtctagaatatcaacgacagcagctgatccaggagaggcagcag
ttccatttggaacagttaaaggcggccgagttccgggctagaaaccacgccattcaaagg
ttacaagcggaaaccggcggggcaccagtaggcgttcccgtcccaggagtagtaccgggc
gttcccggggttccaggagttacagtaggaccgcccccaactgaaacgggacacgagccg
ccccatcaaccagctcctcatcatcacccttaa
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