Pieris napi (green-veined white): 125054009
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Entry
125054009 CDS
T08706
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pnap
Pieris napi (green-veined white)
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125054009
03036 Chromosome and associated proteins [BR:
pnap03036
]
125054009
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125054009
Chromosome and associated proteins [BR:
pnap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125054009
SLIK complex
125054009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
125054009
NCBI-ProteinID:
XP_047511619
LinkDB
All DBs
Position
1:complement(7813955..7824735)
Genome browser
AA seq
1812 aa
AA seq
DB search
MLLKGFMNESESESTSEKGEKTDSSGSGSGSESDSGSSSSGSASGANSGSEKSSNAGQFH
FSEDGKSSLKDSHANSSKSDHHTDKDSSDDSIRQKSRNNHDKIKSDLWEDNPDIYGVRRS
ARSRKEPDRLKLADSDSSDKGRSNGRRNRKKSDSWNSDSSDSDSDIKGSPPPPSKRPGQR
GVPLRKKKPTRRRFTSDDEDESSELSDDTKSRTATRRTGAAAVSYKEASDEQTDSSDLLE
VDNVEGEMEAEPEPEEHSETIEKILGIRRGKIGVTGNVTTVYYIEENGDPNKDCNPDDEE
TTEPQYLIKWKGWSHIHNTWESEKSIMEQKVKGLKKLENYKKKESELAWWRKQAGPEDID
YFECQSELQQELVKSYNFVERIFAEQTRELEGGGTAHEYFCKWESLPYADATWEDSALIE
KKWPEQVQHFKAREAATTTPSRHCPVLRRRPKFHQVKEQPEYMGKDQTYILRDYQMDGLN
WLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKTQQLYGPFLCVVPLSTMTAWQREFT
QWAPDVNVVTYIGDVSSRDIIRQFEWSFASSKRLKFNAILTTYEILLKDRQFLKTFSWAC
LLVDEAHRLKNDDSLLYKALKEFDTNQRLLVTGTPLQNSLKELWALLHFIMPYRFESWEE
FEKDHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWIL
TKNYSELRKGVKGSTNTFINIVIELKKCCNHALLTKPEDFETRASLATTDAVEKLLRGSG
KLLLLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALD
HFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVN
IYRLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASGTSANNPFNKEDLN
AILKFGAEELFKDDDENDEDPVCDIDEILQRAETRDEGPAMVGDELLSAFKVASFAFDEE
KAVMGVKKDGGDEEGKDWDDIIPENVRKTLAEQAKTKKMEDLYLPPRRKTQQNNLNSSEG
DRRRRGRGGEADGADGADGDADADDSDVSDADVSADDDRPRKRGRPPASHREKIKGFTDQ
EIRRFVKSYKKFSAPLKHLDSIACDAELQEKPLAELKKLGEILQERCRSVLNDTADTSND
HSDGRKNARKSFKLGGVSVNAKTMAACQNELAPLDEFLPETKEERLKWHLDFKTRPANFD
VAWAVEDDSKLLAGIYQYGLGSWEAIKMDSSFGIGDKILTNEDKKPQAKHLQSRADYLLK
LIKKLLDQKNGKQKQRKPRMKRGTKEPVTKDIVEDDVSSGDDHKKNNRAAKEKGKLKMEE
LLTHDENSCERKEKDKKRSKKEGKDRTKNDKVKKNKKPAGPMHFTANNEPRALEVLGDLD
PSVFEECKEKMRPVKKALRALDNPDQTLSETEQVSRTRACLSQIGSQIDICLDAYPDPEK
KVEWRSNLWYFVSKFTNFDAKQLFRLYKYGLKKSDTKHKDGKHKENVKGNARNNINSNNH
IKSKKDGRNDENSERKEKRQRLEKSDKNNDKAAHASGVKRKLEEGECDPDPNDSKRHERH
KHKHKDRKCRDGSLKRDDLSHRERSRSERERDRERDRDRERDRDRERDRDRERDRERSRT
RRDSGGGGPRVRQPYAHPHSEHPTHGHPPHSTHPAHPGWTPPAYPGPRQYRSDRNPRTHD
KRSRFGGYPPMGGGPYSGYYDGAAMPGSMGFPPVRPYPEDWRGYAQPEYPYDDREYEREV
YRRDYDRRAPPT
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgaagggctttatgaatgaatctgagagtgagtctacaagtgaaaagggtgag
aagacagactccagtggatctggatccggaagtgaaagtgacagtggctccagttcatct
ggttcagcttcgggtgctaactctggatcagaaaaatcttcaaatgcagggcaatttcac
ttcagcgaggatggcaagtcatcactaaaagatagtcatgccaattcatctaaatctgat
caccacactgataaggattcatctgatgatagcattagacaaaaatcccgaaataatcat
gataaaataaagtcagatctttgggaggataaccctgacatttatggtgtaagaagatct
gcaaggtctcgtaaagaaccagataggttaaagttggcagatagtgattctagtgacaaa
ggaagaagtaatggtagaagaaatagaaagaagagtgattcctggaattctgattcctca
gatagtgatagtgatattaaagggtcaccacccccaccttccaaaagaccaggccaaaga
ggagtaccattaagaaaaaagaaaccaacaagaagaagatttactagtgatgatgaagat
gaaagtagtgaactttcagatgacacaaaaagtcgaactgccacacgtcgcacgggagct
gctgctgttagttataaagaagccagcgatgaacaaacagattcctcggatttgctggaa
gtggataatgttgagggcgagatggaagctgaacctgaacctgaagaacacagtgaaaca
atagaaaaaatacttggtattcgacgcggcaaaataggagtcacgggaaatgtgactaca
gtttactatatagaagaaaatggtgatccaaacaaggattgcaatccagacgatgaagag
actacagaaccacagtacctcattaagtggaagggatggtcccacattcataatacatgg
gaatctgagaagtcgattatggaacaaaaggttaaagggttgaaaaaattggaaaactat
aagaaaaaggaatcagagttagcatggtggagaaaacaagctgggccagaagatattgat
tattttgaatgtcaatcagaactgcaacaagaattagtcaagtcttataactttgtggag
aggatatttgctgaacagactcgggagcttgagggaggtggaacagcacatgaatatttt
tgtaaatgggaatcacttccatatgctgatgcaacatgggaagattctgcacttatagaa
aagaaatggcctgaacaagttcagcattttaaggctagggaagcagcaacaacaacccca
tctagacattgccctgttttgagacgaaggccaaaattccatcaagttaaagaacagcca
gaatacatgggtaaagaccagacatatatattaagagattatcaaatggatgggttaaac
tggttaatacattcctggtgtaaagacaattctgttattcttgccgatgaaatgggttta
ggtaaaactattcagacaatatgttttctgtattacttgttcaaaacacaacaattatat
ggaccattcctttgtgtagtaccattaagtacaatgactgcatggcaaagagagttcacg
cagtgggcgcctgatgttaatgttgttacctatattggagatgtctctagtagagatatt
atcagacaatttgaatggagttttgctagttcaaagaggctaaaattcaatgcaatcttg
acaacatatgaaattttactaaaagatagacaatttttaaaaactttcagttgggcttgc
ctgcttgtagatgaagctcataggctaaaaaatgatgattcacttttgtacaaggcactt
aaagaatttgacacaaatcaaaggttactagtcacaggaacacctttacagaattcactt
aaggaattatgggctctactacattttattatgccttacagatttgaatcttgggaggaa
tttgaaaaagatcatgaagatgcagcgacgaaaggctatgagaaactccacaaacaacta
gagccatttatattaagacgacaaaagaaagacgtggaaaagtccctacccgctaaagta
gaacaaatattacgagtagaaatgacgtcaatacaaaaacaatattacaagtggattctt
acaaaaaactacagtgaattacggaaaggcgtaaagggttcaacaaacacatttatcaat
attgtaatagagctgaaaaagtgttgcaatcacgctcttttgacgaaaccggaagatttt
gaaacacgggcgtcacttgcgacaactgatgcagtcgagaaactattaagaggatctgga
aaattattattgctagataaattgctatgtagacttaaagaaacgggtcatagggtatta
attttttcacaaatggttagaatgttggatatactagcagaatatttgcaaaggagacat
tttccttttcaaagactggatggcagtataaaaggagagttaagaaagcaagctcttgac
cattttaatgctgaaggatctcaggacttttgtttcttgctttcgactcgagcaggaggc
ttgggaattaatttagcaacagctgatactgtgataatatttgattcagactggaatcct
cagaatgacttacaggctcaagcgagagctcatcgaataggtcaaaagaatcaggtcaac
atttatcggttagtaactgccaggtccgtggaagaagacatcgtagagagggctaaacga
aaaatggtactagatcatctcgtgatccagcgaatggacactactggtcgaactgtcctt
aataaacgcgatgcgtccggtacaagtgctaataacccgttcaataaggaagacctcaat
gctatattgaagtttggagccgaagaactgtttaaagatgatgatgaaaatgatgaagat
ccagtctgtgatattgatgaaatcttacaacgagctgaaacacgggatgaagggcctgct
atggtgggagatgaattgctttctgcttttaaagtagccagttttgcatttgatgaagaa
aaggctgtcatgggcgtgaaaaaagacggaggagacgaagaaggcaaagattgggatgat
atcataccagaaaatgtccgaaagacgctagcggagcaagcgaaaaccaagaaaatggag
gatctatatctaccgcctcgtaggaaaacgcaacaaaacaatttgaacagctcagaaggt
gatcgcaggagacgtggccggggtggggaagctgacggtgccgatggggcagacggagac
gctgacgctgatgattcggatgtttctgacgctgatgtcagcgctgatgatgaccgccct
aggaaacgtggtcggccaccggccagccacagggagaagatcaagggatttacagatcag
gagataagacgatttgtgaagagttacaaaaagttttcagcgccattgaaacatttagat
agcattgcttgcgatgcagaattacaggaaaaacctttagcggaattaaagaagttagga
gaaattcttcaagagaggtgtagatctgttctcaatgacacagctgatacttcgaatgat
catagcgatggccggaaaaatgcaagaaaatcgtttaaattgggcggcgtgtctgtaaac
gccaagacgatggcggcatgccaaaatgaactcgcgccattagatgaatttcttcccgaa
acaaaagaggaaagacttaagtggcatttagattttaaaacgcgaccggctaattttgat
gtcgcctgggccgtagaggatgactctaaactacttgcagggatttaccaatatggcttg
ggatcctgggaggctataaaaatggattcatcctttggtattggggataaaatattaacc
aatgaggataagaagccgcaagcaaagcatttacaatcgagagccgattatttacttaag
ctaatcaaaaagttgctcgaccagaagaatggtaaacagaagcaaagaaagccgcgtatg
aagcggggcactaaagagccagtcaccaaagacatagttgaagatgatgtcagttctggt
gatgatcataaaaagaataacagggctgcaaaggaaaagggtaaactcaaaatggaagaa
ctattgacacacgatgaaaactcgtgtgaaagaaaggaaaaagataagaaaaggtcaaag
aaggagggtaaagacaggacaaaaaacgacaaggttaaaaagaataaaaaaccagctggg
cctatgcattttactgcaaataatgaaccgcgggctttagaagtattaggagatttagat
ccatccgtttttgaagagtgtaaagaaaaaatgaggccagttaagaaagccttaagagcc
cttgacaatccagatcaaactttatcagaaacagaacaagtatcgagaacaagagcttgc
ctctcgcaaatcggaagtcaaatagatatctgtttggacgcttatcctgatcctgaaaag
aaggttgagtggagaagtaatctctggtactttgtctccaagtttacaaactttgacgca
aagcaattgtttaggttatataaatatggtctcaaaaaaagtgatacaaagcataaggat
ggaaaacacaaggaaaatgttaagggaaatgccagaaacaatattaattctaacaatcac
ataaaatcaaaaaaagatggcagaaacgatgaaaattccgagcgaaaggagaaacgacag
cggctcgagaaatctgataaaaataatgataaagctgcacacgcttcgggggttaagaga
aaattggaagagggtgaatgtgatcctgatccaaatgatagtaaaagacatgaaagacat
aagcacaagcataaggatcgcaagtgtagggatggaagcctgaagcgagatgatttgtcc
catagggagcggagtcggagcgagcgggaacgggatcgggagagggatcgagaccgggag
cgggatcgcgatcgagagagggaccgggatcgagaacgagatcgagaacggtcgagaacg
aggcgggatagcggaggtggcggaccccgagttcgacaaccgtatgcacatccgcattcg
gaacatcccacacacggtcatccgcctcactccactcaccccgcccaccctggctggacg
cctccagcctatccgggccccaggcagtaccggagcgatcggaatccgagaacacacgat
aagagaagcaggtttgggggttatcctcccatgggaggcggcccctacagtgggtactac
gacggggcggcgatgccgggcagcatgggattcccgcccgtgaggccatatcccgaagac
tggcggggctacgcccagccggagtacccctacgatgaccgggaatatgaacgtgaggtc
tatcgacgagactacgatagacgcgccccacctacatag
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