Pieris napi (green-veined white): 125054217
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Entry
125054217 CDS
T08706
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pnap
Pieris napi (green-veined white)
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125054217
03016 Transfer RNA biogenesis [BR:
pnap03016
]
125054217
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125054217
Spliceosome [BR:
pnap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125054217
Transfer RNA biogenesis [BR:
pnap03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
125054217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
PGK
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125054217
NCBI-ProteinID:
XP_047511934
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All DBs
Position
11:4211946..4218505
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AA seq
729 aa
AA seq
DB search
MTAFEEFGVLPELGKAIDEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
IQIVWETLKDIQEGKSSKIITQTSTEWTMSFFDRTEALAVTPDGLRCQSRDQSGWHGCRA
TKGVHTKGLYYYEAIVTDEGLCRVGWSTQAARLDLGTDRLGFGFGGTGKKSNAKQFDDYG
SAFGKNDVIGCMLNLNNGEIRYTKNGEDLGVAFKLDQSRRADCYFPAVVLKNAEMTFNFG
ATPFKQPLPKDYTPISQAPKEFVKVNVVSAGAATGSSKPVNNAPQAIIIEPSRELAEQTC
SQITLFKKHLDNPKVRELLVVGGINVKDQINELNSGVDIVVGTPGRLEDLIQGGYLALTH
CRFFVLDEADGLLKAGCGELIERLHRQIPKITSDGRRLQMVVCSATLHAFEVKKMAEKLM
HFPTWVDLKGEDAVPETVHHVVVNVDPQKDLFWQTARKQIQTDGVHSKDNIRSGNTTPET
LSEAVKVLKGEYCVRAIREHKMDRALLFCRTKLDCDNLERFLKSFGSEFSCVCLHGDRKP
AERKANLEKFKQSQVKFLICTDVAARGIDISGLPFMINVTLPDEKSNYVHRIGRVGRAER
MGLAISLVSTVPEKVWYHGEWCSSRGRNCFNTNLIDDRPKGCCMWYNEPQYLADIEDHLN
ITIQQVEPDMKVPSNEFDGKVVYGQKRTQVGSGYQDHVSQMEPVVRSLKELESQAQIYYL
KSHHNVVVA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagaatttggagtccttcccgaactagggaaagcaatagatgaaatg
gagtggacgctacctacagatgtccaagccgaagctatccctcttattcttggtggagga
gatgtgttgatggctgcagagactggcagtggaaaaactggtgccttttgcttacctata
atacaaattgtatgggaaactcttaaagatatacaagaaggaaaatcaagtaaaattatt
acacaaacctcgacagaatggaccatgtcgttctttgaccgaacagaggcattagccgtc
acacctgatggtttacggtgccagtctcgtgatcaatcaggttggcatggctgtagagca
actaaaggtgtacacacaaagggtttatactactacgaagctattgttactgatgaaggc
ctatgcagagttggttggtctacacaagcggcaagactagatttaggtactgatagacta
ggctttggatttggtggtacagggaagaagtcaaatgcaaaacagtttgatgattatggc
agtgcttttgggaaaaatgatgtaataggttgtatgttaaatttaaacaatggcgaaatt
agatatacaaagaatggtgaggatctaggtgttgcttttaaattagatcagtcccgaagg
gcagactgctattttcctgctgttgttttaaaaaatgctgaaatgacctttaattttggt
gcaacaccatttaagcaaccgcttcctaaagactatactcctattagtcaagcacctaag
gaatttgtcaaagtgaatgttgtctcagctggggctgcaacaggctcgagtaaaccagtt
aataacgcaccacaagctattattattgagccttcaagagaattagcagaacaaacctgt
tcccaaataacgttatttaaaaagcatttagacaatccaaaagttagagaattgctagtt
gtgggaggaataaatgttaaagatcaaataaatgaattaaattctggtgttgatattgta
gttggaactccaggtcggttagaagatcttatacaaggaggttatttagccctaacacac
tgccgttttttcgtattggatgaggctgatggtctactgaaagcagggtgtggcgagctt
attgaaaggctacataggcaaataccgaaaattacttcagatggacgacgattacagatg
gttgtttgttcagcgactctacacgcctttgaagtcaagaaaatggcggaaaaattaatg
cacttcccaacctgggtggacttgaaaggcgaagatgcagtgccagaaaccgttcatcat
gttgtggtcaatgttgatccacagaaagatctcttctggcagactgcaaggaagcaaatc
caaacggatggtgtccattctaaggataatataagaagcggtaacacaacccctgaaaca
ttgtctgaagctgtcaaagtactgaaaggagaatactgcgttcgtgcgattagggaacat
aaaatggacagagctttactattttgtcgtacgaaactcgattgtgataatttggagcgg
tttcttaaatctttcgggagcgagttttcgtgtgtctgtctgcatggagatcgtaaacct
gccgaacgaaaagctaatttggaaaaatttaaacagtcccaagtgaagtttcttatctgt
accgatgttgccgctagaggcatagatatatcagggttgccattcatgatcaacgtgact
ctaccggacgagaaatcgaactatgtgcatcgcattggccgagtgggtcgagcggagaga
atgggattggccattagtcttgtctctaccgtgcctgagaaggtatggtatcacggggag
tggtgttcttctcgcggccgtaactgttttaacacaaacctcattgatgacaggcccaag
ggatgctgcatgtggtataatgaacctcagtacttagcggatatagaagatcacttaaat
ataacaatccaacaagtagagcccgacatgaaagtgcctagtaatgagtttgatggcaaa
gttgtctatggacagaaacgtactcaagttggctccggttatcaggaccacgtgagccaa
atggaacctgtagtaaggagcttgaaggaactcgaatcgcaagcgcaaatctattattta
aaatctcatcataatgttgttgtagcctga
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