Pieris napi (green-veined white): 125055724
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Entry
125055724 CDS
T08706
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125055724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnap03019
]
125055724
03041 Spliceosome [BR:
pnap03041
]
125055724
Messenger RNA biogenesis [BR:
pnap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125055724
Spliceosome [BR:
pnap03041
]
Complex B
Other components
Prp19-related factors
125055724
Complex C
125055724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
DHR-2_Lobe_A
NRDE-2
PPR
ARM_TT21
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
125055724
NCBI-ProteinID:
XP_047514191
LinkDB
All DBs
Position
14:4166957..4170011
Genome browser
AA seq
843 aa
AA seq
DB search
MPLLDGKEIEIFFSEEDLPYEEEILRNPFSVKHWLRYIEHKKGAPKHEINLIYERALKEL
PGSFKLWYNYLKLRRSQIRGKCIIDPSYEDVNNCFERSLVFMHKMPRIWMDYCTFLTDQY
KITMTRKAFDSALRALPITQHHRIWPLYLGFLKKHDIPETAVRVFRRYLKLCPEDTEEYI
DYLISIDKLDEAAIKLAQIVNNENFQSKHGKSNHQLWNELCELISKNPDKIHTLNVDAII
RGGLRRYTDQLGHLWNSIADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFEE
LSLSKKMEEVSKNTNPSEDEDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNVAEWHKR
VKLYEGKPHEIIDTYTEAVQTVDPKLAVGKLHTLWVGFAKFYETNDQIEDARLIFEKATQ
VIYVKVDDLASVWCEWAEMEIRHENYEEALKLMQRATVLPSRKVAYHDENETVQMRLYKS
LKVWSMYADLEESFGTYKSCKAVYDHIIDLKIATPQIIINYGLFLEEHNYFEEAFRAYEK
GIALFKWPNVYDIWNTYLTKFLKRYGGSKLERARDLFEQCLENCPPEFAKSIFLLYAKLE
EEHGLARHAMSVYERATTAVLPEQMFEMFNIYIKKAAEIYGVPKTRQIYEKAIETLAEGN
SREMCVRFAEMETRLGEIDRARAIYAHCSQMCDPRITAEFWNTWKEFEVRHGNEDTMREM
LRIKRSVQATYNTQVNMMSAQMLSSAAQAAGTVSDLAPGMKDGMRMLEAKAAEMAVQSKG
NIMFVRGETQGLKDSSDKVVNPDEIDIDEASENSEEEDESEIAPVEKKEIPAAVFGGLLP
EKE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgcctttattagacggaaaggaaattgaaatcttctttagtgaagaagacctgccatat
gaggaagaaattttgagaaaccctttttctgttaaacattggctgagatatattgaacat
aaaaaaggagctcccaagcatgaaataaatcttatttatgagcgagctcttaaagaatta
cctggatcctttaaattatggtataactatctcaagttaagaaggtcccaaataagggga
aaatgcataatagatccatcatatgaagatgttaacaattgttttgaaagatcattggtc
tttatgcacaaaatgcctaggatatggatggactactgtacatttttaacagaccagtac
aaaataaccatgacaagaaaagcttttgatagtgcattgagagcattaccaataactcag
catcatagaatttggcctctgtacttgggttttttaaagaaacatgatattccagaaact
gctgtgcgtgtttttagaagatacttaaagctctgtccagaagatactgaagaatacatt
gattatttgatatcaattgataaattagatgaagcggctattaaattggctcaaattgtt
aataatgaaaactttcagtcaaaacatggtaaatctaatcatcagctatggaatgaatta
tgtgaattgatatctaaaaatcctgataaaatacatacactaaatgtagatgctattata
agagggggtctgcgacgctatactgaccagttaggacatttatggaattctatagctgac
tactatgtaagaagtgggctctttgaaagagcaagggatatttatgaggaagctattcaa
actgtaactacagtccgtgacttcacgcaagtttttgatgcttatgctcaatttgaggaa
cttagtcttagtaagaaaatggaagaggtttctaaaaataccaatcctagtgaagatgaa
gatatagacttagaacttaggctggcaagatttgaatatttgatggaaagaagattgcta
ttacttaattcagttttgttaagacaaaatccacataatgttgcagaatggcataaaaga
gtaaagttatatgaagggaaacctcatgaaattattgacacatacacagaagctgttcaa
actgttgaccctaaattggctgttggaaagttgcatacattgtgggtaggttttgcaaaa
ttctatgaaactaatgatcaaatagaagatgcaagattaatttttgaaaaagcaacacaa
gtaatctatgtaaaagtagatgatcttgcttctgtttggtgtgaatgggcagaaatggag
ataagacatgagaactatgaagaagctctaaaattaatgcaaagagcaactgtgctgcct
agtagaaaagttgcctaccatgatgaaaatgaaacagttcaaatgcgtctatataaatct
cttaaagtatggtccatgtatgcagatttagaagaaagctttggtacatacaagtcctgc
aaggctgtctacgatcatatcattgatttaaaaatagcaacaccacagattattataaac
tatggcttgtttctagaagaacataactactttgaagaggccttcagagcttatgaaaaa
ggcattgcgctttttaaatggcctaacgtgtatgacatttggaatacatatttaactaag
tttttaaagagatatggaggaagtaagcttgaaagagctagagatctgtttgaacaatgt
ttagaaaattgtccacctgaatttgctaaatccatatttttattatatgcaaagttagaa
gaagaacacgggttagcaagacatgctatgtcagtatatgagcgtgctacaactgctgtc
ctaccagagcagatgtttgaaatgtttaacatctatataaagaaagctgctgaaatatat
ggtgtcccaaaaacacgccaaatatatgaaaaagccatagaaaccttagctgaaggaaac
tcaagagaaatgtgtgtacgctttgcagaaatggaaacccgtcttggcgaaatagataga
gctagagctatctatgcccattgtagtcaaatgtgtgatcctaggattacagcagaattc
tggaacacttggaaagagtttgaagttagacatggtaatgaagatactatgcgtgaaatg
ttaagaataaagagaagtgtgcaagccacatacaatacacaggtcaatatgatgtctgca
caaatgctaagttctgcagcacaagcagcaggcactgtgtctgatttagccccaggaatg
aaagatggtatgagaatgttagaagctaaagcagcagaaatggcagtccaaagtaaagga
aatattatgtttgttagaggagaaacccaaggccttaaggatagttctgataaagttgtg
aaccccgatgaaattgacattgacgaggcttcagaaaacagtgaagaggaagatgaaagt
gaaatagcaccagtggaaaagaaagaaattccagctgcagtttttggtggtttgttgcca
gaaaaagaataa
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