Pieris napi (green-veined white): 125055801
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Entry
125055801 CDS
T08706
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03020
RNA polymerase
pnap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125055801
09124 Replication and repair
03420 Nucleotide excision repair
125055801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125055801
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125055801
Enzymes [BR:
pnap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125055801
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125055801
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125055801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
125055801
NCBI-ProteinID:
XP_047514373
LinkDB
All DBs
Position
14:complement(4317626..4321506)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYEEEDQYEEEDVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVED
SPPIELQAEAQHSSGEIEIPPKYHLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTYS
APLYVDITKTIIKENEDPIETQHQKTFIGKIPIMLRSTYCLLSNLTDRDLTELNECPLDP
GGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKTEIRSCLEHSSRPTSTLWVNMMA
RGGQSIKKSAIGQRIVAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVIQEQNVALNFIGARGARPGVTKERRIKYAREILQKEMLPHVGVSDFCETKK
AYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQK
FIDKGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSH
LRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSPI
LEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSEV
SMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDQLKERDYNNYGWQNLVASGV
VEYIDTLEEETVMIAMSPDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIV
AILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQGM
RNALYDKLDEDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRFSKRDASTFLRNSE
TGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
LTPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYGY
HLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKGC
KNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVN
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagaagaagatcagtatgaagaggaagatgtggaagaaatatcatcagaattg
tggcaggaagcttgctggatagtaattaacgcgtatttcgatgaaaagggtctagtaagg
cagcaactagacagtttcgacgagttcatacaaatgtccgtacaaagaattgttgaagat
tctcctcctattgaactccaggctgaagcacaacattcttctggcgagatagaaattccg
cctaaatatcatttgaagtttgaccagatttacttatccaagccaacacattgggaaaaa
gatggtgctccatcgcctatgatgcccaatgaagcacgtttacgtaatttaacttactct
gcgcctttatatgtcgacattactaaaaccattattaaagaaaatgaagatcctattgaa
acacagcatcaaaaaacttttattgggaaaattcccattatgttgagatccacttactgt
ttgcttagcaatcttactgacagggatttgactgaattaaatgagtgtcctctggatcct
ggtggttatttcattataaacggctcggaaaaggtgttgattgctcaagaaaagatggca
acaaatacagtatatgttttcagcatgaaggatggaaagtatgcttacaaaactgaaatt
cgttcttgcttggaacatagctctaggccaacttctaccctttgggttaatatgatggct
cgtggtggacaaagcataaaaaagtcagctattggtcaaagaattgttgctattgttcct
tatattaaacaagagattcctattatgattgtattcagagctcttggttttgtagctgac
agagatattttagaacatattatttatgactttgatgatcctgaaatgatggaaatggta
aaaccttccctagatgaggcatttgttattcaagaacagaatgtggctctaaactttatt
ggagctagaggagcaaggcctggtgtgactaaagaaaggcgaataaaatatgctagagaa
attttacaaaaggaaatgttacctcatgttggtgtttcagatttttgtgagactaaaaaa
gcttatttcttgggctacatggtacataggttacttctagctgctttaggtcgcagagaa
cttgacgacagagatcattatggaaataaaaggttggatttagctggaccattgttagct
tttctgtttcgtggattatttaagaatttactgaaagaagtaaggatgtatgcacagaaa
tttattgataaaggcaaagactttaatctggaactagctattaaaacaaaaattatcaca
gatggtttaaggtactctcttgctactggtaactggggtgaccaaaagaaagctcaccag
gctagagctggtgtatcacaagtgttaaaccggttgacatttgcatcaacattgtcacat
ttgcgaagagttaactcaccgattggacgtgatggcaaattagctaagcctcgacaactt
cacaatacactttggggtatgatatgtcctgcagaaacaccagaaggcgcagctgtgggc
cttgtaaagaacttggcactgatggcttatatttctgttggaagtcagccatcaccaatt
ttggagttcttggaggagtggtctatggagaatttggaagaaatagcaccgtcggctatt
gcagatgctacaaaaatatttgtaaatgggtgttgggtaggaatacatagggacccagaa
caattaatggctactctgagaaaactgagacgtcaaatggatataattgtatctgaagtc
agtatgatccgtgatattcgtgacagagaaataagaatttatactgatgccggaagaatt
tgtcgtccattattaattgttgaaaatggagcacttttgcttaagaaaaagcatattgat
caattgaaggaaagagattataataactatggttggcaaaatttagtagcaagcggtgtt
gttgaatacattgatactttagaagaggagacagttatgatagctatgagccctgatgat
ttagctcaagttaaagaatatgcttactgtacaacttatacccattgtgaaatccatcca
gctatgatattaggagtttgtgcatcaattattcctttccctgatcacaatcaaagcccc
agaaatacataccagagtgctatgggtaaacaagctatgggagtgtatattaccaatttc
catgtaagaatggacaccttagctcatgtgttgtattatccacacaaaccactggtcaca
acaaggtctatggagtacttgcgtttccgtgaattaccggctggaatcaattctattgtt
gctattttgtgctacacaggatacaatcaggaagacagtgtcattttgaatgcttcagct
gtggaaagaggattctttagatctgtattctataggtcttacaaagactctgagtctaag
aggattggtgatcaggaagaacagtttgaaaagcctactagacaaacatgtcaaggaatg
agaaatgccctgtatgacaagctggacgaagatggcattatagctcctggcataagagta
tcaggagatgatgttgtgataggaaaaactattactttaccggaaaatgatgatgaactt
gagggaacaaccaaacgtttctcaaaaagagatgcatcaacgtttttgcgtaacagtgaa
actggtatcgtcgatcaagtcatgttgacattgaacagtgaaggttataaattctgcaaa
atcagagtacgttcagtgcgcattccccaaattggcgataagttcgcctctcgtcacggg
caaaagggaacatgtggaattcaatacagacaagaagacatgcctttcacttgtgaagga
ttaacacccgacattatcatcaacccgcacgctatcccatctcgtatgacaattggtcac
ttgattgaatgtattcaagggaaagtatcatcgaacaaaggcgaaatcggtgacgcaact
ccctttaacgacgcggtaaatgtgcaaaaaatttcatctttattgcaagaatacggctat
caccttcgtggtaatgaagtaatgtacaacggacacactggaagaaagataaatgctcag
gtgttcttggggcctacttattaccagcgtcttaagcacatggtggatgacaaaatacat
tcacgagctagaggacctgtgcagattttggttagacaacctatggagggaagggcgagg
gacggcggtctacgttttggagaaatggagcgtgattgtcaaatcgctcacggcgcagcg
caattcttacgcgagcggctatttgaggtatcagatccatacagaatccacgtctgcaac
ttctgcggtctcatagctattgctaatcttagaaataacacttttgaatgtaaggggtgt
aaaaacaaaacccagatttcacaagtaagactaccctatgccgcgaaattattattccaa
gaattgatgtctatgaatattgcgccgaggcttatggtagttaattaa
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integrated database retrieval system
