Pieris napi (green-veined white): 125056549
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Entry
125056549 CDS
T08706
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125056549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125056549
03036 Chromosome and associated proteins [BR:
pnap03036
]
125056549
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125056549
Coactivators
SAGA/TFTC/STAGA complex
125056549
Chromosome and associated proteins [BR:
pnap03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125056549
STAGA complex
125056549
TFTC complex
125056549
SAGA complex
125056549
SLIK complex
125056549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
VPS8_N
DUF6197
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
125056549
NCBI-ProteinID:
XP_047515654
LinkDB
All DBs
Position
15:9010065..9016922
Genome browser
AA seq
651 aa
AA seq
DB search
MGEKSTPLLAVLQLLKKYNLKGTEEILRKEANLGDTEFQNLDLPEVEIANILSVHHTESD
PFTYEHAYDCLKKFIENSLDICKYELSTLLYPVFVHMYLSLILYDHNEHAAKFLERFGQE
QEDYYQDDLQQLSIVKAKEQIKGNELAEIYSTNKFDVQLSRDASSQLKRFLHEQKSSPVI
INIINNHILIDIHDGPGRTQAQVKATAGGILGEASRNENRAKVYYGLLKEPYIEVLATPP
EDEEEVEETPDKPKKKKAKKDNVFMKKPKVDPNAPPTDRIPLPELKETDKIEKGKALREA
SKRVQLGPETLPSICFYTLLNSGHTALCADICDDSSLLAVGFNTSTIKVWTLTSVRLRGM
KSVDKLQDIDKEAGDVLVRMMEEKDRDTCRTLFGHSGPVYKVAFDPFKTLLLSCSEDSTI
RLWSLQCWTCVVVYRGHVWPVWDVRWSPHGHYFASASHDRTARLWATDHHQPLRFFSGHL
SDVDCVQFHPNSNYVATGSSDRTVRLWDCLTGTQLRLMTGHKRPILTLSFSVCGRWLASG
GGGGEVVIWDLSSGAPAAHLPLHHTAPVTALAFSRDGALLASGSLDCTIKLWDFALITDE
SANDENIASSSPAKEEKILLRSFATKNSPLKNLHFTRRNLLLAVGSYEGSS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaaatcgactcctcttttggctgtattacagctattaaagaaatataattta
aagggcaccgaagaaatattgcgaaaagaagcaaacttgggagataccgagttccaaaac
ttagatttacctgaagttgagatagcaaacatactctcagtacaccacactgagagcgat
ccttttacttatgaacatgcatatgactgtcttaaaaaatttattgaaaactctcttgat
atttgcaagtatgaattgtcaactctcttataccctgtatttgttcatatgtacttatca
ttgatattgtatgatcataatgaacatgctgcaaaatttttggaaagatttggtcaagaa
caagaagattattaccaggatgacctacaacaactatctattgttaaagctaaagagcaa
attaagggaaatgaattagcagagatttacagcacaaacaaatttgatgttcagctatca
agagacgcttcgtcacaattaaagagatttcttcatgagcaaaagagttctccagtgatt
attaatataattaacaatcacattctcattgacatacatgatggtcccggtagaacacaa
gctcaggtgaaagcaactgctggtggaattcttggggaggcctccagaaatgaaaatcgt
gcaaaggtttactatgggcttctaaaggagccatacattgaagttcttgctaccccacct
gaggatgaagaagaagtggaagaaacacctgacaagcctaaaaagaaaaaggcaaaaaag
gataatgtgtttatgaaaaaacctaaagtagatcctaatgcaccacccacagacagaata
ccattacctgaattgaaagaaacagataaaatagaaaaaggcaaagcgctaagggaggct
tcaaagcgagtccagttgggaccagaaactctgccttccatttgcttctatacattactg
aacagcggacatactgctttatgtgcagacatatgtgacgactcctctttgctggctgtt
ggttttaacacttctactattaaggtatggactctgacttcagtcaggcttcgtggcatg
aaatctgtggacaaattgcaggatatagacaaggaagcaggtgatgtcttggtaaggatg
atggaagagaaggacagagatacatgtcgcactctgtttggtcatagtggaccagtctat
aaagtcgcgtttgatcctttcaaaacgttactgctgtcttgctctgaagattctacaatt
cgtctgtggtcactgcaatgctggacgtgtgtggtcgtgtaccgtggccacgtgtggccg
gtatgggacgtccgatggtcaccccacggacattattttgcgtccgcctcacatgatcgc
acggcgcgactctgggccactgaccatcatcagcctctgaggttcttttcgggacatctt
tcggacgtcgattgcgtgcagttccacccaaactcaaactacgtggcgacgggatccagt
gatcgaactgtgcgtctttgggactgtctcacagggacacaacttcgactcatgactggg
cacaagcgtcccatactaacgctgtccttctctgtgtgcggtcgttggcttgcatcgggt
gggggtggtggtgaagtggtcatttgggatctgtcgtcgggtgctccagcggcccatctc
cctcttcatcatacagcacctgtcactgccctagctttcagccgggatggagcgctactt
gcctcaggatcattagattgtacaataaaattatgggacttcgccctgatcacagatgaa
agtgctaatgatgaaaacattgctagcagttcaccagcaaaagaagagaagattttgcta
agatcttttgcaacaaagaattccccattgaagaatttgcactttacacgtcgcaacctt
ttgttagctgtaggctcatatgaaggaagttcttag
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integrated database retrieval system
