Pieris napi (green-veined white): 125056849
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Entry
125056849 CDS
T08706
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap04382
Cornified envelope formation
pnap04512
ECM-receptor interaction
pnap04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125056849
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125056849
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125056849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnap04147
]
125056849
00536 Glycosaminoglycan binding proteins [BR:
pnap00536
]
125056849
Exosome [BR:
pnap04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
125056849
Glycosaminoglycan binding proteins [BR:
pnap00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125056849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
125056849
NCBI-ProteinID:
XP_047516118
LinkDB
All DBs
Position
15:complement(8674648..8687401)
Genome browser
AA seq
1856 aa
AA seq
DB search
MAVRVLWLVTALVPLSGVKTSPQDDLYARGDIEENNINPSRWPPTEYWPTRGLSNRPDLP
TVQPSSPYSQQQASYPSQPSYPPQPSYPPQPSYPPQPSYPPPPSYSQSQQSYSQSQPTYP
RNNFAVYDPVTHQRVPPNEITRNCTAPGCCVPKCFAEKGNRGFPGHQGSPGMRGLPGHEG
AEGPQGPKGQKGQVGPQGPRGPKGERGKPGAQGFVGLSGPPGPQGDSGAPGIPGRDGCNG
TDGDPGIMGSKGLQGPRGIPGPKGDKGDKGQAAHMGRYPKGQKGEPGADGMQGPQGPVGL
TGSPGLAGPKGNTGPMGPLGLRGDKGSKGSKGQSIQGDKGDRGDRGDRGPGCPPAPLVSV
DNKGAIKGVKGDSGTKGDKGEPGRIGEKGDTGLMGEPGLSGQMGIKGEKGIRGNPGERGR
DGMFGPSGPMGQKGDQGNDGLPGLPGRPGSKGEPGRDGQPGLRGLKGIPGPAGGRTGSRG
PPGPTGPRGYMGPAGAPGTDGRPGERGSSGPMGPPGGQGEPGTPGIEGPAGHKGDKGEPG
LDGLQGETGPKGYDGPIGPTGPRGPKGEDGYSIPGERGNPGVPGLPGERGQKGEHGYQGL
RGVPGNSTLGTPGSPGEMGMPGEKGERGRPGFDGLPGNPGEKGNIGGRCNECWPGGPGQK
GDHGSDGIPGERGERGPSGPAGLTGERGSDGLNGLPGSVGAPGDRGDEGPMGPPGESGAD
AIIPSNLVKGPPGERGLQGEKGLMGPKGDRGVMGPKGDRGLNGMPGFKGDQGRMGTPGID
GISGSDGSPGIPGNKGMSIKGEKGELGSQGFKGDKGISGRGGLKGEPGQCPNYLQLLTKG
EKGNQGAPGPQGPQGMPGEKGDRGFTGKTGDKGQKGLTGRTGPVGPRGYPGLKGDKGDLG
SMGFPGTPGDTGSRGFPGLPGLKGDKGEIGPSMPGPPGPTGFLGKKGDSGPRGIPGTPGK
DGPMGPVGLTGEKGDRGFAGSPGFPGPAGLKGEPGPVGPPGVPGIPGTPGREGPKGQQGF
PGKPGNPGVIGLPGQKGDRGIQGIEGPKGFPGPRGRPGQKGATGYDGSPGDKGDKGELGF
PGIPGEPGLPGPIGPVGIEGPKGDQGFQGPPGLPGRTGLTGEKGDRGFPGPLGQKGEPGR
AAEKGERGFPGIPGVRGLDGQPGQDGQKGDKGDIGVPGIGIPGLSGEKGDIGFPGNPGVA
GEPGEKGNRGLPGLNGLKGDRGPVGDSGLPGRPGLDGLPGPAGDAGLPGLTGVKGGKGER
GFPGRDGFDGQKGDLGPVGPPGLVGDRGYPGLKGDRGLPGPSLNVKGDKGDIGPPGLRGL
TGQKGETGRDGLQGQKGDKGDRGFTGERGDYGQTGARGDKGDTGPAGPAGISGRTIKGEK
GLPGIPGKHGGRGLPGATGEMGERGLPGLPGQTGRPGTPGQPGPQGEKGDQGREGVAGPP
GYDGTPGAMGPPGLIGERGEKGDKGAIGFGAQGEKGNQGVPGLPGLQGERGEKGDRGFDG
LNGQPGPMGEEGDKGEIGFQGSIGVPGVEGVKGDKGDAAIVVYGAKGEPGPRGPPGFNGA
PGQDGIPGSRGLDGLPGEKGNQGFPGAHGPQGPPGVQGLQGFQGERGEAGRIGFPGAPGP
AGAPCQNRDYLTGILLVKHSQTEIVPECEQGHVKLWDGYSLLYIDGNEKAHNQDLGHAGS
CVRKFSTMPFLFCNLNDVCNYASRNDRSYWLSTNNPIPMMPVENNEIKKHISRCVVCEVP
ANIIAVHSQTLDIPSCPVDWTSLWIGYSFVMHTGAGGNGGGQALASPGSCLEDFRATPFI
ECNGEAGTCHHFANELSFWMTTIEDNKQFDMPERETLKAGRLLQRVSRCAVCIKNT
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggcggtccgcgtactttggttggtaaccgcgctggtgccgctttcaggagtaaagacg
agtccgcaagatgacctttatgcaaggggagatatcgaagaaaacaatataaatcccagt
cggtggccgccgacggaatactggccaacgagaggtttatcgaaccgaccagacttacca
acggtccaaccctcatctccgtattctcaacaacaagcatcctatccttcacaaccatcc
tatcctccacaaccttcctatcctccacaaccttcctatcctccacaaccatcctatcct
ccaccgccatcctattcacaatcacaacaatcctattcccaatcacaaccaacttatcct
cgcaataactttgccgtttacgatcccgttactcatcaacgagtgccacctaatgaaatt
acacggaattgtactgcgcccgggtgctgtgttcccaaatgttttgctgaaaaaggaaac
aggggatttcctggacatcaagggtcaccgggaatgagaggtcttccaggacacgaaggt
gctgaaggtccacaaggtccaaaaggacaaaaaggtcaagtaggaccacaaggtccacga
ggccctaagggtgaaaggggaaaacctggtgctcaaggatttgttggtttatctggacca
ccaggtcctcaaggagattccggagcacccggaatcccaggaagagatggttgtaatgga
accgatggagatcctggtataatggggtccaaaggattacaaggacctcgtggaataccg
ggaccaaaaggagacaagggtgacaaaggtcaagctgctcatatggggaggtacccgaaa
gggcaaaaaggagaaccaggtgctgatggtatgcaaggacctcaaggaccagttggatta
actggttctcctggacttgcaggacctaagggaaatacaggacctatgggcccacttggt
ctaaggggagataaaggatcgaaagggtcaaaaggccaatcgatacaaggagacaaaggt
gacagaggagatagaggtgatagaggtcctggttgcccgccagcacctttagtttctgtt
gacaacaagggcgctattaagggtgtcaaaggagatagtggcactaagggtgataaaggg
gaacctggaagaataggagagaaaggagataccggtctcatgggtgaaccagggttgtcg
ggacaaatgggtattaaaggagaaaagggtataagaggaaatccaggagagagaggtcgt
gatggtatgttcggtccttcaggcccaatggggcagaaaggtgaccaaggcaacgatgga
ttgccgggtctaccaggccggcctggatctaaaggagaacctggaagggatgggcaacct
ggcttaagggggttaaaaggtattcctggtccagctggtggaaggactggatcccgtggc
ccccctggtcctactggaccaagaggatacatgggacctgcaggtgctccgggaactgac
ggaaggccgggagaaagaggttcatcaggccctatgggacctccagggggacaaggtgaa
ccaggtacacctggtatagaagggcctgccggccacaaaggtgataaaggagaacccggt
ctagatggtttgcagggtgaaacaggcccaaagggttatgatggccccattggacccact
ggaccacgtggtcctaaaggagaggatggatattcaattcctggggaaagaggaaatcct
ggagtgccaggattacctggagaaagaggtcaaaaaggtgaacatggttatcaaggccta
agaggtgttccgggaaattctactttaggtacacctggtagcccaggagaaatgggaatg
ccaggtgaaaagggtgaaagaggtcgtccaggatttgacggactacctggtaatcctggt
gaaaagggtaatatcggtgggcgatgtaatgaatgctggccgggtggtccaggacagaag
ggtgatcatggatctgatggtattcctggagaaaggggtgaaagaggtccttctggtcca
gctggtttgaccggtgaacgaggctctgatggacttaacggattaccaggctcagttgga
gctccaggtgatagaggagacgagggccccatggggccacctggagaaagtggagctgat
gcaattataccttctaatttagtaaaaggacctccaggagaaagaggtcttcaaggagaa
aaagggctgatgggaccaaagggcgatagaggagtcatgggacctaaaggggaccgtgga
ttaaatggaatgccagggtttaagggcgatcagggtagaatgggtacgcctggtattgat
ggtatatctggtagtgatggatcgccaggaattccaggaaacaaaggaatgtcgattaaa
ggagaaaaaggagagcttggatctcaaggattcaaaggtgataaaggtatatcaggaaga
ggtggtttaaagggtgaacctggacagtgtccaaactacttgcaattattgacaaaaggt
gaaaagggtaatcaaggtgcaccaggtcctcagggcccacaaggaatgcccggagaaaag
ggtgacagaggtttcacaggaaagacaggagacaaaggtcaaaaaggattaactggacgt
actggtcctgttggtcctcgaggttacccaggacttaaaggtgataaaggagacttaggc
tcaatgggttttcctggtacccctggtgacacagggtcaagaggatttccaggtcttcct
ggtttaaagggagataaaggtgaaattggaccgtcaatgccgggacctcctgggccaact
ggatttttaggtaaaaaaggagacagtggacccaggggtatacctggtacacctggtaag
gatgggcctatgggaccagtgggtttgactggtgaaaagggggatagaggttttgctggt
tcccctggatttccgggacctgcaggcttaaaaggagaaccaggtccggttggacccccg
ggagttccgggaataccaggtacaccaggaagagagggaccaaagggtcagcaaggtttt
ccaggtaaaccaggaaatccgggtgttatagggctacctggtcaaaaaggtgatagaggc
atccaaggaatagaaggtcctaagggattcccaggtccacgaggtcgcccaggacaaaaa
ggtgctacgggatacgatggtagtcctggagataaaggtgataagggtgaattaggtttt
ccaggtattcctggagaaccaggtttgcctgggccaataggacctgttggaatagaagga
ccaaagggagatcaaggttttcaaggacccccagggctaccgggaagaactggacttacg
ggtgagaaaggcgatagaggtttccccggaccattaggacaaaaaggggaaccaggcaga
gccgcagaaaagggagaaagaggttttccaggaattccaggtgtaagaggattagacgga
caacctggtcaagatggccaaaaaggagataagggagatattggagttcctggaataggg
attcccggactttcgggggaaaagggcgatataggttttcctggaaaccctggagttgct
ggtgaaccaggcgaaaaaggtaaccgcggtttgcccggcttaaacggtcttaaaggagat
aggggaccagttggagattcaggtttacctggtcgaccgggattagatggattgcctggt
cctgcgggtgacgctggtctacctggtttaacaggtgttaaaggaggaaagggagaaaga
gggtttcctggtagagatggatttgatggtcaaaaaggagatctagggccagtcggaccg
ccaggcttagtaggagacagaggataccctggtttaaagggagacaggggacttcccgga
ccatcacttaacgtaaaaggagacaaaggagatatagggcctccaggactacgtggtcta
acagggcagaaaggtgaaactggacgagatggactgcaaggtcaaaaaggtgataaggga
gaccgaggattcactggtgaaagaggagattatggtcaaactggtgccagaggtgataaa
ggtgacactggaccagctggaccagctggcatatctggccgaactattaaaggagaaaaa
ggcttgccaggtattccaggtaaacatggggggcgtggcttgccaggtgcaaccggagaa
atgggagagcgcggattacccggattaccggggcaaacaggacgacctggaacgccagga
caacctggcccacaaggggagaaaggagatcaaggtcgtgaaggtgttgcagggccgcca
ggatatgatggaactcctggtgcaatgggtcctcctggtctgatcggtgaaaggggagaa
aagggagacaaaggtgcgattggatttggtgcacaaggagaaaaaggtaaccaaggagtt
cctggtctacctggcttacaaggagaaagaggggaaaaaggagatcgagggttcgacggg
ctaaatggtcaaccaggaccaatgggagaagaaggtgataagggtgaaataggtttccaa
ggtagcataggtgtaccaggcgtggaaggtgtcaagggtgacaaaggtgatgcagctata
gttgtatatggagcaaagggagaacctggacctaggggaccacctggctttaacggtgct
cctggtcaggatggaattcctggatctagaggattggacggtctaccaggtgagaaagga
aatcaaggattcccaggcgctcacggaccacaaggccctcctggagtacaaggcttacaa
gggttccaaggtgaaagaggtgaagcaggtcgcattggattcccgggtgcaccaggacct
gctggcgctccttgccaaaatagagattacctaacgggaattcttttagtaaaacatagt
cagactgaaatagtgccagaatgtgaacagggtcacgttaagctatgggatggatattct
ctactctatattgatggaaacgaaaaagcgcacaatcaagatttgggccacgccggttcc
tgcgtccgcaaattcagtacaatgccattcctattctgtaatctcaatgacgtgtgtaat
tatgcaagtagaaatgatcgaagctactggctatcaactaacaaccccatacctatgatg
ccagtagaaaataatgaaattaagaaacatatatcaagatgtgttgtatgcgaagttccc
gctaatattatagcagttcacagtcaaacactagatatacccagttgcccggttgattgg
acatctctgtggataggatacagtttcgttatgcataccggtgcgggaggtaatggaggc
ggacaagcacttgcaagtccggggtcctgtcttgaagacttccgagccacaccgttcata
gaatgtaacggtgaagcaggcacttgccatcacttcgccaatgaactcagtttttggatg
acaactatcgaagacaataaacagttcgacatgcccgaacgagagacattaaaagcaggt
cgtttactccaacgagtttctagatgcgcagtttgtattaaaaacacgtag
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integrated database retrieval system