Pieris napi (green-veined white): 125057118
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Entry
125057118 CDS
T08706
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125057118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnap02000
]
125057118
Transporters [BR:
pnap02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125057118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_22
AAA_29
RsgA_GTPase
AAA_23
nSTAND3
nSTAND1
Mg_chelatase
SRP54
Motif
Other DBs
NCBI-GeneID:
125057118
NCBI-ProteinID:
XP_047516551
LinkDB
All DBs
Position
16:complement(7391160..7435571)
Genome browser
AA seq
1699 aa
AA seq
DB search
MSKYEKLKLLIWKNFLLQRRHKWQTVFEIASPVVFSLFLILIRCLVDPQSKPAESYQPFL
PTYFNMSSRHMGNLTSAKREGTLAFSPENPLIRNVTKNAMATVALDNLGFLALFFDTGML
PEPKGFKDAQELEKALTQPNAMNKILVGIQFNDNMANATKWPDHIDLTLRFPAVMRTPMY
DHPLRLSWRTNLLFPLFPLPGPRAPGDIYGGQTPGYSPEMFLAVQHAISQEIIKQKSGKP
INTKIYLQRFPQNAYRKDDLLVAMERFISMIIMLCFAYTFVNTVRVVTAEKELQLKETMT
IMGLPSWLHWLAWFIKQFSFLLISVVLMVILFKIPFNATKDGERYSVFTYTPWSVLLFFM
VLFVMASLAFCFMVSVFFTRANTAASFMGLMWFSTYSAYFLTQMLYEDVSLHTKFLLSLI
SNAAMGFVLQMLIICEGTSQGLQWSEIFSPVAYHDDFQPGHVVLMLIVDTIIYMTIALYV
EKIRPGNYGVPLPWYFPLTKSFWLPNKTRTAGITLKDGIDQEYKNALLKVVHDEEPKGVP
MGINIENLTKVYKGRKKAVDNLNLRMYENEITVLLGHNGAGKTTTISMLTGMVPPTSGTA
TINGYNIVSETELARKSLGLCPQHNVLFPDLTVAEHIVFYSRLKGVQKSKINDEVNHFLK
LLELEEKRDVQSAHLSGGQKRRLSVGAAMCGSSRVVLLDEPTSGLDPAARRSLWDLLQKE
KKGRTIILTTHFMDEADVLGDRIAIMSGGKLQCVGTPYFLKKHYGIGYKMTIVKQEDCNV
QNVTSFLRNYVPDIRENTNIGSELTYILPNEHVSKFPEMLKKFEEERSSLRVSSYGLSVT
SLEEVFMKAGAEDHDVITVQKNNYTNHNNSVIVPIENNRNHFANNEPLQKVKGAKLLRNH
IKAMFLKLAYNSMRNKLSAFIQIVTPIINITISVIIARSWRFITNLPPLELTLTSGFKNT
ETLISEGVNLTESSVERRTMLAYMDFFKSSTYPNMELNDIGTMDMGKFYLKLSESNPARI
RYENLIGATFAPNRITAWFSNYGYHDSAISLSLANNALMNALSPGSSLRVINYPLPYSIE
NLVRILASGSSLGFQFAFNIGFCMAFVTAFLVLFVIKERVSGAKLLQRISGVRPGVLWTC
SFIWDWFWMLCVYMTIVLTLAFFQESTLSTPEELGRVLLVLVVFSLATIPLHYLASFFFE
ASATGFSKMCFVNIFSGCMPFLITEVLRLPEFGSPYYAGIFDWVFAPLPLYCMSRSFKDM
SLSSFKMLICDGLCTQLELQNCTRQSLCTQINMTVCCNLDENTFLKWEEPGIGRYLFMMS
LVGVIAFSVLLIKEYEVINKIFYSETPYRPLPIRSDEDSDVAAERHTVQQLTKPELAQHS
LICKDLTKYYKEFLAVNRLTFAVRKGECFGLLGINGAGKTSTFRMATGDTHLSSGDVYVH
GMSVKTQIRDVHANMGYCPQFDALLENLTARETLKIFCLLRGIPVKIGSQWAFQLAEQLG
FAMHYDKKVHECSGGTKRKISTALALLGDAPLVFLDEPTTGMDPASKRRVWRCISDAVVS
GRSVVLTSHSMEECEALCSRLTVMVNGRLFCLGPLQHLKNKFSQGYTLIVKCRETSQRVA
DVARIREFVIANFQDARHIETYLGISTYYIHDQELLWWQLFDKMEEAKSLYPIEDYSVSQ
TTLEQVFLQFTRMRDNSRT
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtatgagaaactcaagctgctgatttggaaaaattttcttttgcaaagaagg
cataaatggcagactgtctttgaaattgcgtcgccagtggtgttttcgttatttttaatt
ttaatacgatgcctcgttgatccgcaatcgaaaccagctgaatcataccaaccatttcta
ccaacgtattttaatatgagcagcagacacatgggaaatctaacatcggcaaaacgagaa
ggaactcttgcgttttcaccagagaatccattaatacgaaacgtaactaagaatgcaatg
gcaacagttgcattagataacttaggatttctggctttattttttgatactggaatgcta
ccagagcctaaaggttttaaggatgctcaagagttagaaaaagccctaacccaacctaat
gctatgaataaaattcttgttggaatccagtttaatgataatatggctaatgccacaaaa
tggccggaccatattgatctaacactaagatttccagctgtaatgagaacacctatgtat
gaccaccctcttaggttgagttggagaacaaatctactgtttcctttgtttccactgcca
ggacccagagctccaggagacatatatggaggtcaaacaccaggctactcaccagaaatg
ttcttagcagtccaacatgcaatttcccaagaaataattaaacaaaaatctgggaaaccg
ataaatacaaaaatatacttacaaaggttcccacagaatgcgtataggaaggacgatcta
ttggtggcgatggagagatttatatctatgataattatgctctgttttgcatacactttt
gttaatactgtaagagtggtgacggcggaaaaggaattgcagctgaaggaaaccatgaca
atcatgggtctaccgtcatggcttcactggctcgcttggtttataaaacagttctcgttt
cttctcatatccgtcgtgctcatggtgatacttttcaagatcccatttaatgccaccaaa
gatggggaacgatattctgtcttcacatacacgccgtggtccgtccttctattcttcatg
gttctatttgtaatggcttctcttgccttctgtttcatggtgagcgtgttctttacaaga
gcaaacactgcggcttcattcatgggtcttatgtggttttcgacatattcagcttatttt
ctaacgcaaatgctttacgaagatgttagcctacatacgaaattcctactcagtttgata
tcaaatgctgcgatgggcttcgtactacagatgctgataatctgtgaagggacgtctcaa
ggcttacaatggagcgagatcttttcacccgtcgcatatcatgacgatttccaaccgggc
catgtggtattaatgttaatagttgataccataatatacatgactatcgctttgtatgtt
gagaaaatacgtccaggcaattatggtgtgccgttgccctggtattttccattaacgaag
agcttctggttgccgaataaaactaggaccgcagggataacattaaaggatggtatcgat
caagagtacaaaaatgcgttgttgaaggtagttcacgacgaagagccaaaaggtgtacca
atgggtataaatatagagaacctcacaaaagtatacaaaggccggaagaaagctgtggat
aatttaaatctacgaatgtatgaaaatgaaattacggtgttgttaggacataatggagct
ggaaaaaccactacaatatcgatgcttacaggtatggtaccgcccacttccggtacagct
actataaacggatataacattgtgagtgaaacggaactcgcaagaaaatcactcggtctc
tgcccgcaacataatgtgctcttcccggatctgaccgttgccgaacatattgtcttctat
tcgaggcttaaaggcgtgcagaagtcgaaaataaatgacgaagtcaatcatttccttaag
ttgttggagttggaagaaaagagagatgtgcagtcagcacatttatcgggaggtcagaaa
aggcggttgtccgttggcgctgctatgtgtgggtcctcaagggttgtgttgttagatgaa
cccacttccggattggacccagccgcgaggagatcgctgtgggatctcttacagaaagag
aaaaaagggcgaacgataattctaactacacattttatggacgaagctgacgtgctaggt
gaccgcatagctataatgtctgggggtaaactccaatgtgtgggaacaccatatttcctt
aagaagcattatggtataggttataagatgaccatagtgaagcaagaggattgtaacgtg
caaaatgttaccagttttttgagaaattacgtcccggatattagggaaaatacgaatata
ggttcggaattaacttacatactgcctaatgagcacgtcagcaaatttcctgaaatgtta
aagaaatttgaagaggaaaggagttccttgagggtatcgagttatggcctttctgtcacg
agcctcgaagaagtttttatgaaagccggtgccgaggaccatgatgtgataacggttcag
aaaaataactatacgaatcacaataatagtgtcattgtccccatcgagaacaatcgaaat
cactttgcaaacaacgaaccgttacaaaaagtaaaaggcgcaaaattactaagaaatcac
ataaaagcgatgttcctcaaactagcctataattctatgagaaataaactctcagccttc
atacagatagtaacaccgattataaatataactatatcagttataatagcccggtcatgg
cggtttataaccaacctacctcccttagagttaactttaactagtggttttaagaatacg
gagacacttatatctgaaggggttaatttgacggaatcaagcgtcgagagaaggactatg
ttggcttatatggatttttttaaatcgtcaacgtatcctaatatggagcttaatgatatc
ggaactatggacatggggaagttttatttaaaattgagcgaatcgaaccccgcccgtata
cgttacgagaacttaataggcgcaacgttcgcgccgaatcgcatcacagcctggttcagt
aattatgggtatcacgactcggccatatcactctccttggctaacaatgcgctgatgaat
gctctatcgcctggttcttctttacgggttattaactatcccctgccgtattccattgag
aatcttgttagaattctagcatcgggtagcagtttaggattccagttcgcgttcaatata
gggttctgtatggcgtttgtcactgcgttccttgtgttatttgttataaaggaacgagtt
agcggcgccaaactccttcagcgtatatctggagtgagacctggcgtgctctggacgtgt
tctttcatctgggactggttctggatgctgtgcgtctacatgacgatagtgctcacgctt
gcgttcttccaggaatcaacgctgtctactccggaagagttgggcagagtccttcttgta
ctagtggtgttttcgctggcgacgataccgctacattacttggcatccttctttttcgaa
gcttcggcaactggtttctcgaaaatgtgctttgtcaacatattttcaggttgtatgccg
tttctaataacagaagttctgcgtttgcctgaattcggtagcccgtactacgcgggtata
ttcgactgggtgttcgcgcctttaccgctttattgcatgagcagaagtttcaaggacatg
agcctgtcgtcattcaagatgctgatatgtgacggcctttgtacgcaactggagcttcag
aattgtacgaggcaatcgctgtgcacgcaaattaacatgaccgtgtgttgtaacctggat
gaaaatacatttttgaaatgggaagagcccggaatcggacgttatctatttatgatgtcg
ttggttggtgtcatagcattctcggttctgcttatcaaagagtacgaggtgattaataag
atattctactcggagaccccttaccggccattaccaataaggtcggacgaagatagtgac
gtggcagcagaaagacacacggtacaacagcttactaaaccagaattggctcagcatagc
ctgatctgcaaagatctcaccaagtactataaggagttcctcgctgttaatagactgact
tttgcggtgcgtaaaggcgaatgtttcggattattgggcatcaatggggcgggtaaaacc
agtacgttccgtatggcaacgggtgacacgcatctaagttcgggcgacgtatacgtacat
ggaatgtccgttaagacgcaaatacgggacgtgcacgcaaatatgggttactgcccgcaa
ttcgatgcattactagaaaaccttactgcacgcgaaacactcaaaatattctgcctgctg
cgcggtattccagtgaaaatcggttcccagtgggcctttcaacttgcagaacagcttggt
ttcgctatgcattacgataaaaaggttcacgaatgcagtggtggaacaaaacggaaaata
agtacggctcttgctttgttgggggatgctccattggttttccttgacgagcctaccaca
ggtatggacccagcatcaaaacgccgagtgtggcgttgtatcagtgacgccgtcgtatcg
ggacgtagtgttgtactcacctcgcacagtatggaggagtgtgaagcgctttgctccaga
ttaactgttatggtcaatggacggctgttctgtttgggaccgctacagcatcttaagaac
aaattctcacaaggttatacactaattgtgaaatgtagagagacgtcacaaagagttgca
gacgtagcaaggataagagagtttgtcatagccaattttcaggatgctagacacatcgaa
acctacctcggcatcagtacgtattacattcacgatcaagagctgctctggtggcagctt
ttcgacaaaatggaggaggccaaatccctctaccccatcgaggactactccgtatcgcag
accacgctcgaacaagtgttcttacagtttacgcgtatgcgagataactcacgtacgtaa
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integrated database retrieval system
