Pieris napi (green-veined white): 125057367
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Entry
125057367 CDS
T08706
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125057367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125057367
03019 Messenger RNA biogenesis [BR:
pnap03019
]
125057367
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125057367
Messenger RNA biogenesis [BR:
pnap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125057367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCHC_2
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
125057367
NCBI-ProteinID:
XP_047516977
LinkDB
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Position
16:complement(62963..73782)
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AA seq
291 aa
AA seq
DB search
MEVIVANVDHIKFDIDYALEQQYGALPLPFPGMDKSTAAVCEFFGQSGGCNNGPRCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLAGFCPDGASCKYMHPRFELPAPPEQTK
DTKRLPVCHYCSEVGHKASTCHKLPPDQREVAQKQEEARYRALGYLKQVGEEDSQQTLHR
MQRMMHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSNQPGQNNNNVFKKSN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggaagttatagtagcaaatgttgatcatattaaatttgatattgattatgctctcgaa
cagcagtatggagcgttgcctttgccatttccaggaatggataagtctacagcggcggtt
tgtgagttttttggacaatctggaggttgtaataacggaccccggtgtccttacaggcat
gttcgtggtgatcggactgtggtgtgtaaacattggttgcgagggctttgtaaaaagggg
gatcagtgcgaatttttacatgaatatgatatgactaaaatgcctgaatgttacttttat
gctagatttaatgcttgtcataataaggagtgtccatttcttcacattgacccagaaagc
aaaatcaaagactgtccttggtacgatagaggtttttgtagacatgggccacattgtcgc
caccggcatgttaggcgtgtcctttgtacgaactatttagctggattctgccctgacggt
gcaagctgcaagtacatgcatccgcgatttgagttgccagcacctcccgagcagactaag
gacactaaacgacttccagtatgtcattactgttcagaagttggtcacaaagcttccact
tgtcataaacttcctcctgatcaaagagaagttgctcagaaacaagaagaagccaggtac
agggctttaggttatttaaaacaagtgggagaagaagattctcaacaaactctacacaga
atgcagcgaatgatgcataagcctctagaagaagtgacttgcttcaaatgcgggacaaaa
ggacactatgctaacaagtgtcccaagggacatctcgcttttctatcaaatcagcccggc
caaaacaataataacgtgttcaaaaaatcgaattaa
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