Pieris napi (green-veined white): 125057412
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Entry
125057412 CDS
T08706
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125057412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125057412
03009 Ribosome biogenesis [BR:
pnap03009
]
125057412
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125057412
Spliceosome [BR:
pnap03041
]
Complex A
U1 snRNP components
U1 related factors
125057412
Complex B
125057412
Ribosome biogenesis [BR:
pnap03009
]
Eukaryotic type
Pre-60S particles
Helicases
125057412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
DUF2443
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125057412
NCBI-ProteinID:
XP_047517050
LinkDB
All DBs
Position
16:complement(688691..699133)
Genome browser
AA seq
667 aa
AA seq
DB search
MYDDRRGGRGGGRGGPRGGRGGRGGSRGGRSSDRSQDRGNRFGGSRGGRDGGRGGSRGFG
GRDRGGRDGRDDFRSNFKNEQPGGALRKIRWDTITLTPFQKNFYNPHPNVQMRSMAEVEA
YRSQHQITVKGRDVPPPSVYFEEGGFPDYAMKEILKQGFPHPTPIQAQGWPIALSGRDMV
GIAQTGSGKTLAYILPAIVHIINQPRLLRDEGPIVLVLAPTRELAQQIQQALVSMNGDTV
DRDRMPGPMDVVATDFGQNVQVRNTCIFGGAPKGPQGRMLERGVEIVIATPGRLIDFLEK
NTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQNLAEEFL
VDYIQINIGSLSLSANHNILQIVDVCEEWEKNDKLLTLLNEISSEEETKTIIFAETKRKV
DDITKTINRAGWHALAIHGDKNQQDRDYVLGQFRQNPGAILVATDVAARGLDVEDVKFVI
NYDYPNNSEDYVHRIGRTGRSHNTGTAYTLFTPNNSAKAKDLMSVLSEANQVVNPRLLEL
AQCGTGFKGKGFSRGGSRYRDRDSDSGRGRGRGRDGGRGSRGGRPETRGSRWDNNDSNGQ
SSFNREDGFQRQSFGRDQSRESFRGRGRGRGRGGFGQGFDQGQQGFPDQTQGYQPSSYYN
MYGQQAQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgacagacgcggaggacgcggcggtggacgtggtggtcccaggggcggtcgt
ggaggcaggggtgggtctagaggtggtcgttctagtgatcggtctcaagacaggggaaac
agattcggcggcagtcgagggggacgagatggtggtaggggaggcagtcggggattcggt
ggacgcgatcgaggtggacgagacggcagggatgatttccgcagcaatttcaagaacgaa
caaccaggaggagcgcttcgtaaaattcgctgggatacgattacgcttactccatttcaa
aagaatttctacaatcctcaccccaatgttcaaatgcgctcgatggcagaagtggaagct
tatagaagccagcaccagattacagttaaagggcgtgatgtgcctccaccaagtgtatat
tttgaagagggtggctttcctgactatgcaatgaaagagattctaaagcaaggctttcca
catcctacaccaatccaagctcaaggttggccaattgctttgtctggaagagacatggtt
gggattgcacagacgggttcaggaaagactcttgcatacattttaccagcaattgtccac
attattaaccagccaagattattaagggatgagggaccaattgttctagtcctagctcct
actagggagcttgctcagcaaattcaacaggctttggtatccatgaatggggacacagtt
gaccgagacagaatgccaggccccatggacgttgtggcaacagattttggtcaaaatgtt
caagtgcgcaatacttgtatatttggtggagctccaaaggggccacagggcagaatgttg
gaacggggagtcgagattgtcattgcaacaccaggaagacttattgatttcttggagaaa
aacacaacaaatctgcaacgctgtacctatctggtgttggatgaagcagataggatgttg
gacatgggttttgagccacagataagaaagatcattgagcaaatacggcctgacagacag
gttctgatgtggtccgcgacatggcccaaagaggttcaaaacttagctgaagaattcctc
gtagattacatacagatcaacattggttcgctttctctctctgctaaccacaacattcta
caaatcgtcgatgtctgtgaggaatgggagaaaaatgataaactgctcactctgcttaat
gagatttcatcagaagaggagacaaaaaccattatatttgcagaaacaaagagaaaggtg
gacgacataacaaaaaccatcaaccgagcgggttggcacgcgctcgccattcacggcgat
aaaaaccaacaggacagggattacgttttaggacaattcaggcaaaacccgggtgcgata
ttagtcgctaccgatgtagcggctagaggacttgacgtcgaggatgtgaagttcgtgata
aactacgactatccaaacaattctgaggactacgtgcacagaatcggacgtacgggacgc
tcgcacaacaccgggacagcgtacacgctcttcacgccgaataattcggccaaggcaaag
gacctaatgtcagtgttgtcagaagctaatcaagtggtgaaccctcgattgttggaactg
gcacaatgcggcacaggtttcaaaggaaagggattcagtcgtggcggcagtcggtaccgt
gaccgtgatagtgactctgggcgtggtcgcggcaggggaagggatggaggcagggggagc
aggggaggtagaccggaaaccagaggctccagatgggacaacaatgactcgaatggccaa
tccagcttcaacagggaagacggttttcagcgccagagttttggacgtgaccagagccgg
gagtcattccgcgggcgtggcagggggcgcggtcgcggagggttcggtcagggcttcgac
cagggacagcagggcttccccgatcagacgcaaggataccagccgagtagctattataat
atgtacgggcagcaggctcaatag
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