Pieris napi (green-veined white): 125057981
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Entry
125057981 CDS
T08706
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap04512
ECM-receptor interaction
pnap04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125057981
04518 Integrin signaling
125057981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pnap00536
]
125057981
Glycosaminoglycan binding proteins [BR:
pnap00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125057981
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
FnI_RECK
NELL_VWC_C
CFC
Motif
Other DBs
NCBI-GeneID:
125057981
NCBI-ProteinID:
XP_047517921
LinkDB
All DBs
Position
17:complement(6831793..6847042)
Genome browser
AA seq
1477 aa
AA seq
DB search
MWQAIIACLALLLTPVVSKELSDGRDDFDAPQAQEADLINYDDYNPFGEDENAVIAERDF
RGSTTIPPVKCLDVGRSWSDGDTWKRDNCTLCQCFSGRVNCSVLPTCLSAPSTSRPPVFT
SPQPAITVRGVQGVPGDEGPPGLPGSPGLGGIPGAPGIPGPVGPMPDVNAYLAQLAATAG
GDKGPAFDPYHYMQASVGAPGIRGIPGPQGPPGPQGFQGPRGEPGEPGSPGPLGPPGERG
PIGVPGKDGLPGEDGEPGPPGAAGQTGSRGSPGVPGIQGLKGHRGFDGKDGAKGDQGLPG
EKGPTGLTGPMGPAGPVGPVGPRGERGREGPSGTPGIRGVDGAPGTPGLMGNVGKPGSPG
FPGSPGLKGEIGVQGPKGSQGIQGPRGEPGRPGQSGEAGPPGLAGRDGIPGEKGIQGQAG
SAGPQGFQGPRGTPGVAGDPGIPGSKGMPGQPGERGLKGEMGIRGESGTPGPRGLPGVVG
PEGKRGKRGLRGPAGNTGPQGERGLLGMRGLPGADGPMGLKGQPGERGNVGLPGLKGSVG
DAGRAGPQGLPGQRGMMGRPGITGKSGASGERGIPGADGRPGEQGPQGLQGAPGLMGSPG
ERGLQGEPGKDGEVGQPGPQGPKGDFGRDGSPGVQGPPGLIGPSGERGSAGPTGPTGFPG
MPGTAGLPGTPGKEGEPGVAGPPGPTGQVGPRGERGFSGDRGQPGAPGIPGEKGESGAQG
TDGLPGLEGPRGTKGHQGPMGPMGLPGPRGLTGFSGEKGERGSLGPQGNEGPPGRQGEQG
PQGPVGPSGPPGEPAERGEPGTPGVPGEVGAPGSTGERGQPGMQGVPGLHGPPGLTGMPG
LKGDRGYAGAKGQQGSAGSPGKQGEAGLQGPSGPIGAKGARGEVGLKGEIGRVGLPGRPG
DLGPPGPQGSTGPSGIPGIPGAKGAIGDSGRPGPPGPNGLTGPQGPEGVKGERGSEGEPG
MQGPVGPAGVSGERGPTGLPGLTGPPGPQGLRGVQGESGSPGKSGNDGAPGPVGSPGPQG
SPGPMGEPGPEGRPGKMGQPGIPGRMGDKGPMGQSGQPGSSGAPGLQGPPGPGGPPGPSG
ERGPRGESGPSGVEGPQGPAGKQGIPGLDGAKGERGEAGADGAKGHAGIPGLPGIVGAPG
RSGDRGLPGPMGPPGKDGDVGSRGPPGRDGSPGLQGGLGPSGARGPQGESGKHGSPGPAG
PPGPPGPPGEGLAYDAAAIAAMLQQGSIKGPDPMGDDPNIPPRFFKDDMPLAERKEIVMK
AYERLKVSLNKFLKPDGSKEAPAKTCGDIKYHHPEFTSGQYWIDPNGGDANDAILVHCDL
TTGASCVFPKPMQSKDITHHGKNEAWLSEMEDGFTISYKADNSQLTYLQLLSLHAVQNVT
LHCRNTIGYYDPASKNYRHGVKLLAYNDAEILPKANNRLRYKALLDECQHKHQDWAKTIV
QYETDKPNRLPLLDIAVRDVGRNNQMFRIELGLACFT
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaagcaataatagcttgcctggctcttctgctgactccagtagtcagtaaggag
ttgtctgatggaagggacgattttgatgcacctcaagctcaggaggcagatctaatcaac
tacgacgattataacccttttggggaagatgagaacgcggtgatagcggagcgtgatttt
cggggttctacgacgattccgccagtgaaatgccttgacgtgggaagatcgtggtctgat
ggagacacctggaaacgagacaactgtactctttgtcagtgttttagtgggagggttaac
tgttcagtgttgcctacttgtctatctgcgccaagcactagtcgcccgccagtgtttact
tcacctcaaccagctattacagtacgtggggtacaaggagttccaggcgatgagggtccg
cctggtcttcctgggtcacctggactcggtggcatacccggggcgcctggaattccagga
cccgtaggacctatgccagacgtaaacgcctatcttgcccagttagcagcgacagcagga
ggagacaaaggtccagccttcgacccttaccattacatgcaagcgtctgttggtgcacca
ggaattagaggaataccgggtccccaaggtccgcccgggccgcagggctttcaaggtccc
cgtggagaaccaggtgaacccggatcacctggacccctagggccacctggagaacgggga
ccgatcggcgtacccggaaaggatggtttgcctggagaagatggtgagccagggccacca
ggggctgctggtcaaactggatccagagggtcccctggtgttcccggtattcaaggattg
aagggtcataggggatttgacgggaaggatggcgcaaaaggagaccaagggttacctggt
gaaaagggtccaacggggttaactgggcccatggggccagctgggccagtgggtccagtt
ggtccacgaggagagcgtggtcgtgaaggaccatctggaacgcctggaataagaggagtt
gatggcgccccaggaacacctggtttaatgggaaacgttggtaaacctggttctccagga
tttccaggctcgcctgggttaaagggagaaataggcgtgcaagggcccaaaggtagtcaa
ggtattcaaggtcctagaggtgaaccaggtagaccgggtcaatccggtgaggctggacca
ccagggcttgctggtagagatggtattcctggtgagaagggaattcagggacaagctgga
tctgcaggtcctcaaggatttcagggaccaagaggcacccctggtgtagctggtgacccc
ggaattccaggctcaaaagggatgccaggacaacctggtgaaagaggtctcaaaggagaa
atgggtataagaggtgaatctggaacccctggtcctcgaggtctaccaggtgtggttggg
cctgaaggaaaacgaggaaaaagaggtttaagaggaccggcaggtaatactgggcctcaa
ggagaaagagggctactgggtatgcgaggattacctggagcagatggccccatgggttta
aaaggacaaccaggggagcgtggaaatgttggattacctgggcttaaaggtagtgtcggt
gacgcaggacgagcaggtccacaaggacttccagggcagagaggaatgatgggaagacct
ggaataacaggaaaatctggagcatcaggagaaagaggtatacccggagctgatggacgt
cctggtgaacaagggccccaaggattacaaggagctcctggcttaatgggaagtccagga
gaaagaggattgcagggtgaacctggcaaagacggtgaagttggccagccgggaccacaa
ggtccaaagggagatttcggacgagatggaagcccaggtgttcaaggccctccgggttta
ataggtccatctggtgaacgagggtcagcgggaccaacaggccctacaggctttcctggc
atgccaggaactgctggattaccaggtactcctggtaaagaaggagaacctggagttgcc
ggccctcctggtcctacgggtcaagttggtcctcgtggggaacgaggcttttcgggtgat
cgaggccagccaggagcaccaggcataccaggagagaaaggggaaagtggagcacagggt
actgatgggctacctgggcttgaaggacctcgaggtaccaaaggtcatcaaggcccaatg
ggtcccatggggcttccgggacccagagggttgactgggttttcaggagaaaaaggagaa
cgaggatctcttggcccacaaggcaacgaggggcctcctgggcgccaaggagagcaaggg
ccccaaggacctgtaggtccttctggaccacccggtgaaccagctgaacgaggagaacca
ggaactcccggtgttcccggtgaagtgggggcgccaggatcaaccggagaacgaggtcaa
ccaggaatgcagggtgtccccggtttgcatggacctccgggtcttactggaatgccggga
cttaagggagatagaggttatgctggcgcgaaaggtcaacaaggatcagcaggcagccca
ggtaaacaaggagaagctggactacaaggaccttcgggcccaataggtgcaaagggtgcc
cgaggtgaagtaggcctcaaaggagaaataggacgagttggacttcctggcagacctggt
gatttaggaccaccaggacctcaaggaagcaccggtccttctggaattcctggtattcct
ggtgctaagggtgctattggggattccggtagaccaggtcctccagggcctaatggactg
actggaccccaaggacctgaaggagtgaaaggtgaaagaggtagtgagggagaacctgga
atgcagggtccagttgggccagcgggtgtgagtggagaaagaggtccaactggattacct
ggtttgactggaccaccaggacctcaaggattacgtggagttcagggtgaaagtggttct
ccgggaaaatctggaaatgacggcgctcctggacctgtaggcagtcctgggccacaagga
tcacctggacccatgggtgagccagggcctgagggccgtcctggtaaaatgggccagcca
ggtatacctgggcgtatgggagacaagggtccaatgggacaatctggccaacccggttct
tctggtgcacctggattacagggacctcctggcccaggtggcccacctggtccgagtgga
gaaagaggtccaagaggggagtcaggaccttctggagttgaaggacctcaaggccctgca
ggaaaacaaggcattcctggcctagacggagccaaaggtgaaagaggggaagcaggtgca
gacggggctaaaggccatgcgggaatacctgggttaccagggattgttggtgcgccaggt
agatctggcgatagaggattacccggacctatgggtcctcctggaaaggatggtgatgtt
ggatcaagaggtccccccggtcgtgatgggagccctggtctacaaggaggcctcggaccg
tcaggggctcgtggccctcaaggagaatcgggaaaacacggcagcccgggtccagcaggt
ccacctggaccgcctggacccccaggagaaggacttgcatatgatgctgctgcgattgct
gcaatgttgcaacaaggttcaatcaaaggaccagaccctatgggtgatgatccaaatata
ccacctcggttcttcaaagatgacatgcctcttgctgaaagaaaagaaattgtgatgaag
gcctatgaacgcctgaaagtgtcattgaacaaattcttgaagcccgatggttctaaagaa
gccccagctaagacctgtggagatattaagtaccatcatccggagttcacaagcggtcaa
tattggatcgatcctaacggtggtgatgcaaatgacgccatcctggtacactgtgatttg
acgactggtgccagttgtgtcttcccaaaacctatgcaatctaaagacatcacccaccat
ggaaagaatgaagcctggctaagcgagatggaagacggattcactatttcctacaaagca
gacaacagccaactgacatacttgcaacttctatcgttacacgcggtgcaaaatgttact
ttacattgccggaataccatagggtattatgatccggcctctaagaactacagacatggt
gttaaacttctcgcttataacgacgctgaaatactgcctaaagcaaataatcgtctacgg
tataaggctttgttggatgaatgtcagcacaagcatcaagactgggcgaagacaatagtg
caatatgaaacagataaacccaatcgcctcccactattggacatcgcggtgagggatgtt
ggtagaaataaccaaatgttcaggattgagctgggactagcgtgcttcacataa
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