Pieris napi (green-veined white): 125058446
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Entry
125058446 CDS
T08706
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125058446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125058446
03009 Ribosome biogenesis [BR:
pnap03009
]
125058446
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125058446
Spliceosome [BR:
pnap03041
]
Complex A
U2 snRNP components
U2 related factors
125058446
Complex B
125058446
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125058446
Ribosome biogenesis [BR:
pnap03009
]
Eukaryotic type
90S particles
Helicases
125058446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Cas3-like_C_2
ABC_tran
Flavi_DEAD
T2SSE
AAA_25
TsaE
AAA_7
Motif
Other DBs
NCBI-GeneID:
125058446
NCBI-ProteinID:
XP_047518476
LinkDB
All DBs
Position
18:complement(597224..611406)
Genome browser
AA seq
735 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAAKSGGSGEGSSDSVANLGTSLSSTSSAPGINPYSGL
PHSPRYHELLQKRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWCVEFACVT
ASKSKGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTVLKYMTDGML
LREAMSDPMLDQYRVILLDEAHERTLATDILMGVLKEVIKQRPDLKLVIMSATLDAGKFQ
QYFDNAPLMNVPGRTHPVEIFYTPQPERDYLQAAIRTVIQIHLCEEVAGDILLFLTGQEE
IEDACKRIKREVDNLGPDAGELKCIPLYSTLPPNLQQRIFEPAPPNRPNGAIGRKVVVST
NIAETSLTIDGVVFVIDPGFAKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKC
FRLYTETAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE
LLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFV
RPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNVR
QQLSRIMDRFNLKRTSTEFASKDYYINIRKALVNGFFMQVAHLERSGHYLTVKDNQIVQL
HPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLRIAPQYYELNNFPVCEARRQLE
LLQERLDSKSYQEGF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacggaggattgaagtaatggatccttttattaaaaagaaacgcgaggaaaaa
gcagcggctgctgctaaatccggcggcagtggtgaagggtcatcagactccgtggccaac
ctaggaacatctctatccagcacctcaagcgcgcctgggattaatccatatagtggtcta
ccacactccccacgctaccatgaactattgcaaaaacgactgggtctccctgtatgggag
tataaaaatgattttatgcgtcttctcaatacacatcaatgtgttgtgcttgttggagaa
acaggatctggtaaaactacacaaattcctcagtggtgtgttgaatttgcttgcgttact
gcaagtaaatccaaaggcgttgcctgtactcagccaagaagagtagcagccatgtcggtg
gctcaaagagtggctgaagaaatggatgtagcattaggacagcaagtcggttacagtatc
cgttttgaagactgttcaggaccacagacagtattaaaatacatgacagacggtatgttg
cttcgtgaggcaatgtcggacccaatgttggatcaatatagagtaattttacttgacgaa
gctcatgaaagaacattagcaacagacattctaatgggtgtcttgaaagaggttataaaa
cagagaccagacctgaaactagttattatgtctgctacgctagatgctggcaaattccaa
cagtactttgataatgcaccactaatgaatgttccgggacgaacacatcccgtagaaata
ttctatacacctcagcccgaacgggactacttacaggcggccatacgtactgtgatacaa
atacatttatgtgaagaagttgcaggtgacattctcctatttttgactggtcaagaagag
attgaggatgcctgtaagaggatcaaacgggaagttgacaacttgggtcctgatgccggt
gaactaaagtgcattccattatattccactctgcccccaaatctccaacagagaatcttt
gagcctgcacccccgaaccgccccaacggtgctattggaaggaaagttgtggtatctaca
aatatagctgaaacctctttaacgatagatggtgtagtgtttgtgatagaccctggattt
gctaagcagaaagtgtataacccaagggtccgtgtagagtctttactggtgtctccaatc
agtaaggcttctgcccagcagcgggctggacgtgccgggagaactcgccccggaaagtgc
ttcaggttgtacacggagacagcctacaagaatgaaatgcaggacaacacatatccagag
attttgagatcaaacttagggtctgtagttttgcagttgaaaaagttggggattgatgac
ctcgtgcactttgacttcatggacccaccggcccccgagacacttatgagggccttggag
ctgctcaactatctcgctgccttggatgatgatggaaacctgacagatttgggtgcggtg
atggcagagtttcctttagacccgcagttggcgaagatgttgattgcaagttgcaaccac
aattgctccaatgagattttgtctatcacagcgatgttatcagtgcctcaatgctttgtt
cggccaaacgaggcgaggaaagccgcggacgaagccaagatgcgtttcgctcacatcgat
ggagaccacctcacgttgctcaacgtttatcacgcgtttaaacagaacatggaggaccct
cactggtgctatgacaacttcatcaactacagatcactcaagtctggagacaatgtcagg
caacagttaagcagaattatggatagatttaatctgaaaaggacaagtacggagtttgca
agtaaagattattacattaatataaggaaagcactcgtcaatggattctttatgcaggta
gcacatctggagagaagcggccattacctaacagtgaaggacaaccagattgtgcagctg
catccgtcgacctgtctggaccacaaacccgattgggtcatttataatgaattcgtgttg
accaccaagaactatatacggaccgttactgatattaaacctgaatggctgctacgcatc
gccccacagtactacgaactaaataacttcccagtgtgcgaagcgagacggcagctggaa
ctactgcaggagcgtctcgactccaagtcctatcaggaaggcttctaa
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integrated database retrieval system
