Pieris napi (green-veined white): 125058811
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Entry
125058811 CDS
T08706
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03013
Nucleocytoplasmic transport
pnap03015
mRNA surveillance pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125058811
09122 Translation
03013 Nucleocytoplasmic transport
125058811
03015 mRNA surveillance pathway
125058811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnap03019
]
125058811
03041 Spliceosome [BR:
pnap03041
]
125058811
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125058811
Messenger RNA biogenesis [BR:
pnap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125058811
Spliceosome [BR:
pnap03041
]
Complex C
Other components
EJC/TREX
125058811
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125058811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125058811
NCBI-ProteinID:
XP_047518917
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All DBs
Position
2:complement(4849366..4850919)
Genome browser
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVKVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMSQDERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgacgatcttctcgactacgaagacgaagagcaggcagatcagcaaaca
gccgacggagcaaccgaagcggcgccaaaaaaagaggttaaagggtcctatgtatctatt
cacagctctggcttcagagatttcctgctcaagccggaaattttacgagctatagttgat
tgcggatttgaacatccgtctgaagtgcaacatgagtgtattccccaggccgttcttggt
atggacatcttgtgccaagcgaaatccggtatgggcaaaacggctgtgtttgtattggca
acgctgcaacaactcgaaccatcagagaatcatgtttatgttctcgtgatgtgtcacacc
agggaactggctttccagatcagcaaagagtatgaacggttctcaaaatacatggctgga
gttaaagtgtcagtattttttggtggtatgccaattcaaaaagatgaagaagtgcttaaa
actgcttgccctcatatagttgtgggaactcctggacgaatccttgctttagtcaatagc
aagaagctgaatttaaagcatttgaaacacttcattcttgatgaatgtgataagatgttg
gagtctcttgacatgagacgagatgttcaggagatatttagaaatactcctcatggaaag
caagttatgatgttttcagctactctaagtaaagagatacgccctgtgtgcaagaaattc
atgcaggatcctatggaagtgtatgttgatgatgaggctaaactcacactgcatgggctt
cagcaacattatgtcaaacttaaggagaatgagaagaacaagaaactttttgaattactt
gatgttttagagtttaatcaagtagtaatttttgttaaatctgtacaaagatgtattgca
ttagcacagttactaactgaccaaaatttcccagctattggaattcacagaaacatgtct
caagatgaacgtctctctcgctaccagcaatttaaagacttccagaaaaggatattagtg
gcaacaaatctatttggtcgaggaatggatattgaacgagttaatattgtgttcaattat
gacatgcctgaagattctgatacttacctacacagagtggcaagagctggtcgatttggt
acaaaaggcttggcaataactatggtttctgatgaaaatgatgcaaagatccttaatgaa
gttcaagatcgttttgatgttaatatcaccgaattaccagaggagatagaactgtcaact
tacatagagggacgataa
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