Pieris napi (green-veined white): 125059343
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Entry
125059343 CDS
T08706
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03022
Basal transcription factors
pnap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125059343
09124 Replication and repair
03420 Nucleotide excision repair
125059343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnap03021
]
125059343
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125059343
Transcription machinery [BR:
pnap03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125059343
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125059343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-C3HC4
zf-RING_UBOX
zf-RING_2
TRAF3_RING
zf-C3HC4_2
zf-P11
zf-RING_4
Zn_ribbon_6
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
125059343
NCBI-ProteinID:
XP_047519676
LinkDB
All DBs
Position
19:8126700..8130588
Genome browser
AA seq
310 aa
AA seq
DB search
MDDQACPRCKTTKYRNPSLKLMVNVCGHALCESCVELLFLKGSGSCPDCNVPLRRSNFRV
QLFEDSMVEKEIDIRKRILKDFNKKEEDFATIREYNDYLEDIESIIFNLVNNIDIINTNK
KIDQYKKDNKELIMKNKAKIGREELELEEILEIEKQMEDSRRTEVLRIDQEAKKQKIREK
EALIDELMFADGDAKDILNTFSQSLANKQEEIVSVPVPKVTHFSSGVKFTRGSGQQPLPI
IEEGPLYKYEPLEIPDRCGPATPSIQEIISNGYLQHVRAENETEKAGGYKSTLPCLRALQ
DALAGLYHTS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccaagcatgccctcgctgtaaaacaacaaaatacagaaatccttcattgaaa
ttaatggtcaacgtttgtggacatgctttgtgtgaaagttgtgttgaattattgttcctt
aagggatctggctcttgccctgattgtaatgtgcctcttcgcagaagtaattttcgtgta
cagttatttgaagattcaatggtagaaaaagagattgatataaggaagcgcattttaaaa
gattttaataagaaagaagaagactttgcaaccataagagaatataatgattatttagag
gatatagaatcaataattttcaacttagtgaataatattgatataattaacaccaataaa
aaaatagaccagtataaaaaagataacaaagagttaattatgaaaaataaagcaaaaatt
ggtagggaagaattagaattagaagaaatattagaaatagagaaacaaatggaagattca
aggagaacagaagtattaagaatagatcaagaagctaaaaaacagaaaataagagaaaaa
gaagcattgattgatgaattaatgtttgctgatggggatgctaaggatatattaaacaca
ttctcacaaagtttagcaaataaacaagaagaaattgtatctgttccagtgcctaaagtt
acacatttctctagtggagtaaaattcacaagagggtctggtcaacaaccgttgcctata
atagaagaaggtccactgtacaaatatgaaccattggaaataccagacagatgtggacca
gccacaccatcgattcaggaaattattagtaatgggtatttgcaacatgtcagagcagag
aatgaaacagagaaagccggtggctataaatcaacactgccttgcttacgagctcttcaa
gatgcactagcggggttgtatcacacaagttga
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