Pieris napi (green-veined white): 125060191
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Entry
125060191 CDS
T08706
Name
(RefSeq) probable ATP-dependent RNA helicase pitchoune
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pnap
Pieris napi (green-veined white)
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125060191
03009 Ribosome biogenesis [BR:
pnap03009
]
125060191
Enzymes [BR:
pnap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125060191
Spliceosome [BR:
pnap03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125060191
Ribosome biogenesis [BR:
pnap03009
]
Eukaryotic type
90S particles
Helicases
125060191
Pre-60S particles
125060191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_30
CPP1-like
Motif
Other DBs
NCBI-GeneID:
125060191
NCBI-ProteinID:
XP_047520915
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Position
21:complement(3607016..3614376)
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AA seq
618 aa
AA seq
DB search
MPMPDKILMRKIKKREKKKVKLNAKKSNNDITKEVIPDESPIEAVKRSLETPSNNSESIP
KKKKKNKQKDEIKTETNEVEIKEEQSDIDSDNEVNNSVGNDDKKNEESQLPGSSLCLGIL
SDQKFTSLEDKVCEPTLMGIKDMGFTTMTEIQAKAIPPLLEGRDLVGAARTGSGKTLAFL
IPVIELIYKLKFKPRNGTGVIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRSTE
AQKLSKGINILVATPGRLLDHLQNTPDFLYKNLQCLVIDEADRILEIGFEEEVKQIIRLL
PKRRQTMLFSATQTKKTEALTALAVKHEPVYVGVDDHREQATVDSLEQGYIVCPSERRMM
VLFTFLKKNRKKKVMVFFSTCMAVKYHHELFNYIDLPVLSIHGKQQQSKRTTTFFQFCNA
ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPEE
LGFLRFLKQAKVTLNEFEFSWNKVADIQLQLEKLISRNYFLNQSAKEAFKSYLRAYDSHH
LKTIFDIDTIDLAKVSKSFGFTVPPAVELKVAPKSGPTHKRKGGGGFGYFKSLNAPAHKK
DEKTKIYRQKGNNKRPIR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgccagataaaatcttaatgaggaaaattaaaaaaagggaaaagaagaaggtg
aaacttaatgcaaaaaaatcaaataacgacattacaaaagaagtaataccagatgaatca
cctattgaagccgtcaaaagatccttggaaacaccatcaaacaattctgaatcaatacca
aaaaaaaaaaagaaaaataagcaaaaggatgaaattaaaacagaaacaaatgaagtagaa
ataaaagaagaacagtcagatattgattcagacaatgaagttaataatagtgtaggaaat
gatgacaagaaaaatgaggagagtcagttaccaggctccagcttatgtttggggatatta
tcagatcaaaagtttacatccttagaggataaagtttgtgaaccaacacttatggggatc
aaagatatgggatttacaactatgacagaaattcaggctaaagcaattcctccgttatta
gaaggaagagatttagtaggagcggccagaacaggatcaggaaaaacactggcattcttg
ataccagtaattgaattaatatacaaattgaagtttaaacccaggaatggtactggagta
attattttatcaccaacaagagagttatcaatgcaaacttttggtgttctaatggaatta
atgaaataccatcatcatacttatggtttggttatgggcggagccaatagaagtacggaa
gcacaaaaactttcaaagggaataaacattttggtagcaacacctggtagattattggat
catttacaaaacactcctgacttcttgtacaaaaatttgcaatgtcttgttatcgatgaa
gctgatagaatacttgagattggatttgaagaggaagttaaacaaattattagactttta
ccgaaacgccgtcaaacaatgctgtttagtgcaacacaaacaaagaaaacggaagctctg
acagcacttgctgtcaaacatgagccggtgtacgtaggagtggatgatcatagggaacag
gccactgttgattcattagaacagggttacatagtgtgtccatcggagaggcgtatgatg
gtgctgtttacattcttaaagaagaatagaaagaagaaggtgatggtattcttctccacc
tgtatggctgtcaagtaccatcacgagctgttcaattacatagatttacctgttctgtct
atacatggtaaacaacagcaatcgaagcgtacaaccacattcttccagttttgcaacgcg
gagaccggtattctgctgtgtaccgatgtcgctgctagaggactggatattccagccgtt
gattggatcgtacaatacgacccaccggatgatcctaaggaatacatccatcgcgtcggt
cgtacggcccgtggtctcggtacgagtgggcacgccctcttattccttagacccgaagag
ttgggtttcctgcgtttcttgaagcaggctaaggtcacactcaacgagtttgagttctcc
tggaataaagtcgctgatatacagctacagcttgagaaattgatatccagaaattacttc
ctgaatcaatcagcgaaagaagccttcaaaagctacctccgagcctacgactcgcatcac
ctgaaaacaattttcgatattgatactattgacttggctaaagtatcaaaatcgtttggt
ttcactgttcctcccgccgttgaattgaaagttgcccctaagagcggaccgacgcataaa
aggaagggcggaggcgggtttgggtactttaagagtttgaacgctcctgcccataaaaag
gacgagaaaactaaaatctataggcaaaagggcaataataaacgacccatacgttga
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