KEGG   Pieris napi (green-veined white): 125061224
Entry
125061224         CDS       T08706                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
pnap  Pieris napi (green-veined white)
Pathway
pnap03018  RNA degradation
pnap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125061224
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125061224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnap03019]
    125061224
   03041 Spliceosome [BR:pnap03041]
    125061224
Messenger RNA biogenesis [BR:pnap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125061224
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125061224
Spliceosome [BR:pnap03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125061224
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 125061224
NCBI-ProteinID: XP_047522490
LinkDB
Position
23:complement(156616..157527)
AA seq 136 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEETQVKARSRNEVSKGRGGQNLRSGRGGSRGAFGNRGRPA
PLRGGGAGRPQNKNKK
NT seq 411 nt   +upstreamnt  +downstreamnt
atgttacccttatcactattacgtacagctcaaaaccatccaatgttagtggaattaaaa
aatggtgaaacatacaacggtcatttagtgagttgtgataattggatgaatatcaattta
agagaggtcatttgcacatctcgagatggagataagttctggagaatgcctgagtgctat
atccgggggagtacaataaagtaccttaggatcccagatgaagttattgatatggtgaag
gaagaaacccaagtaaaggctaggagtcgcaatgaagtatctaagggtcgagggggtcaa
aatcttaggtcagggagaggtggaagtcgaggagcctttggaaacagagggagaccagct
cctcttaggggtggaggagcaggacggcctcaaaacaaaaataaaaaatag

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