Pieris napi (green-veined white): 125061704
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Entry
125061704 CDS
T08706
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125061704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnap03019
]
125061704
Messenger RNA biogenesis [BR:
pnap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125061704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
GTP_EFTU_D4
AAA_22
Motif
Other DBs
NCBI-GeneID:
125061704
NCBI-ProteinID:
XP_047523225
LinkDB
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Position
24:complement(229245..231563)
Genome browser
AA seq
678 aa
AA seq
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MARHRNIRNRSYSDDYDYEDVYGHSVEDDVCLSPSDAAQFIYDRSRNQHAISQFLESDDI
QEEPEVDVDNSRPSFERRESMDLRGLNLSEEDETKLMSCLDELRNVLGDTVLDSILIQAV
IKHKFDYNKALDEILNNNKQDNIKVTTEKTKILIESAPIIPVLDRAPIVSTSTVDKTILI
ASKPEETNTAVVKGFKVNNDTTYSRPQTPRDQSPAVTSRGDNLDESKSTPKVKENKIDPT
IKYSNERGSDKEHLYIVVIGHVDAGKSTLMGHLLCELGVVSQRTLHKYEQESKKIGKQSF
MYAWVLDETGEERVRGITMDVGKAQFETKTKKVIILDAPGHADFIPNMITGAGQADVALL
VVDATRGEFESGFELGGQTREHALLVRSLGVSQLAVAVNKLDTTNWSQERFNVIVKKLKL
FLKQAGFKDSDVTFVPCSGLTGDNLVKPSNEAELLNWYTGPTLLDVIDKFNVPERPVSKP
MRMSINDVYKGTGSGFCVAGRIENGIVNKGDKVLVCPSKEMAEVRNIAINELSTNIAFAG
DQVAITLSGVEMQNVSIGYILSDSVNQVPVTSRFEARLVVFNVKVPITMGYPVLLHHQSL
IESAHIRKLKALLNKSTGEMIKKKPRCLGNNSVAVVDIEVCRPICIERYKDVKELGRVML
RVSGVTIAAGLVTEIYTD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccatcgaaatataagaaatagaagttattcagacgattatgattacgaagac
gtttacggccactcggttgaagacgatgtttgtttatctccaagtgatgctgctcagttc
atatatgatcgttccagaaatcaacatgctatatcacaatttctggagtctgatgacatt
caggaagagcctgaagttgatgtcgataactctcggccgtccttcgagcgtcgcgaatcc
atggatttacgtggactaaatttgagtgaagaggacgaaactaagctaatgtcgtgctta
gatgaactacgaaacgttttgggagatacggtattagattctattctaatacaagcagta
attaaacataaatttgattacaataaagccctagatgaaattttaaataataataaacag
gacaacatcaaagttacgacagaaaagaccaaaatactcattgagtctgcccctattata
ccagttcttgatagagcaccaatagtttcaacttctacagtggataaaacaatattgatt
gcttctaaaccagaagagactaacacagcagttgtaaaaggttttaaagtaaataatgat
accacatatagcagaccacagacacccagagatcaatcaccagctgtgacttctagaggt
gacaatttagatgaatcaaaatcaactccaaaagtaaaggagaacaaaattgatccaact
attaaatactccaatgaacgaggatctgataaggagcatttatatattgttgtaattggt
catgttgacgctggaaaatctaccctaatggggcacttactttgcgagcttggggtggta
agccagagaaccttgcacaaatatgaacaagaaagcaaaaaaattggaaagcaaagcttt
atgtatgcctgggtgttagacgagactggagaggagagagttaggggaatcacaatggat
gttggtaaagctcaatttgaaacaaaaacaaagaaagtcattattttagatgcaccaggg
catgcagattttattcctaatatgattactggggccggacaagcagatgtcgcattgtta
gttgtcgatgccactagaggagaatttgagtcaggttttgaactcggaggacaaactcgt
gaacatgcattgcttgttagatcattaggagtaagccaattagctgtggctgtaaacaaa
ctcgatactaccaattggtctcaggaaagattcaatgtaattgttaaaaagttgaagttg
tttttaaaacaagctggtttcaaagactcagatgtgacatttgtcccatgctcagggcta
actggagacaatctggtgaagccttcaaatgaagcagagttgcttaactggtatactgga
cctactttactagatgtaatagacaagtttaacgttccagagaggcctgtgtcaaagcct
atgcgaatgtccattaatgatgtatataaaggaaccggttctgggttttgcgtagcaggc
cgtattgaaaatgggattgtgaataaaggagataaagttttagtttgtccttcaaaagaa
atggctgaagtcagaaatatagctataaatgaactatcgactaacattgcttttgccggt
gaccaagttgcaataacactatcaggagtagagatgcaaaatgtttctataggttacata
ctgagtgattctgtcaatcaggtaccggtgacttcacgatttgaagcaaggcttgttgta
ttcaatgttaaggtgccgataactatgggatatcctgtattgctacaccaccagtcacta
atagaatcggcacatatcagaaaattgaaggcactattaaataaaagcacaggagaaatg
ataaagaaaaagcctagatgtttaggaaacaattcagtagcggtagtggatatagaagtt
tgtcggcctatttgtatcgagaggtataaggatgttaaagagttgggtcgtgtcatgtta
cgcgtgtcgggagtcactatagcagcaggacttgtcacagagatttataccgattga
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