KEGG   Pieris napi (green-veined white): 125061796
Entry
125061796         CDS       T08706                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pnap  Pieris napi (green-veined white)
Pathway
pnap03030  DNA replication
pnap03410  Base excision repair
pnap03420  Nucleotide excision repair
pnap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pnap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125061796
   03410 Base excision repair
    125061796
   03420 Nucleotide excision repair
    125061796
   03430 Mismatch repair
    125061796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pnap03032]
    125061796
   03036 Chromosome and associated proteins [BR:pnap03036]
    125061796
   03400 DNA repair and recombination proteins [BR:pnap03400]
    125061796
DNA replication proteins [BR:pnap03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    125061796
  DNA Replication Termination Factors
   ELG1-RFC complex
    125061796
Chromosome and associated proteins [BR:pnap03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    125061796
DNA repair and recombination proteins [BR:pnap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     125061796
  Check point factors
   HRAD17(Rad24)-RFC complex
    125061796
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_16 AAA_24 AAA_30 RuvB_N AAA_14 Mg_chelatase AAA_11 Gp44_lid DEAD Rad17 AAA_assoc_2 AAA_19 SLFN-g3_helicase AAA_5 AAA_3 bpMoxR DUF815 Viral_helicase1 AAA_28 ResIII AAA_7
Other DBs
NCBI-GeneID: 125061796
NCBI-ProteinID: XP_047523351
LinkDB
Position
24:complement(895150..901863)
AA seq 350 aa
MQAFLKTGKISASEKAGSSGVKTNKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRESLSG
SDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQL
TVSSTKADGKPCPSYKLVILDEADSMTNAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLREVCESEGVDVGDGEVLEQAVHTCDGDLRRALTALQCC
QRLLGKITAEGLIEVTGLVPDHLVKEYLSVMNYNELELFVEKFLMDAYSASQLLEQLSAT
VVSSGHLTNKQKCEISEKLAVCSHRLLEGGAEVMQLTDLGCTIIMANNNP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaggcatttttaaaaactggaaaaatttcggcgtcagaaaaggctggatcatcaggc
gtaaagacaaacaagaaaaagcccccagcaccttgggttgaaaaatatagaccaaaaaca
attgatgacatagttgaccagggtgaagttgtgcaagttttaagagaaagcttatcaggt
agtgatttgccccatcttttgttctatgggccacctggcacaggaaagacaagtgcaatt
ctggctgctgctcgtcaactttttggtgatataactcgtgatcgggttttagagttgaat
gcctcagatgagagaggaatccaagttattagagacaaagtgaaatcattcgctcaatta
actgtaagcagtacaaaggctgatggtaagccatgtccatcatacaaacttgttatcctg
gatgaagctgattccatgacaaacgcagctcaagcagcattacgtagaactatggaaagg
gaaactaggactacaagattttgtctcatctgcaactatgtatcaagaataatcccacca
attaccagtagatgttcaaaattcagatttaaaccactagccagagagaatgttattaag
agattgcgagaggtttgtgagtcggaaggcgtggatgtgggagatggagaggttttggag
caagcagttcatacctgtgatggtgaccttcgtagagcactcacagcattacagtgttgc
cagcgattacttggaaagattactgctgaaggattgattgaggtgacaggacttgttcca
gaccatttggtaaaggaatacctcagcgttatgaactacaatgaattggagctctttgtt
gaaaaatttttaatggacgcctattcggcatcgcaattactagagcaactcagtgccact
gtagttagttccgggcacttaactaacaagcaaaagtgtgagattagcgagaagctcgct
gtttgctcgcatcgactactagagggcggcgctgaagtcatgcaactcaccgatcttggc
tgtaccattattatggcaaacaataatccttaa

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