Pieris napi (green-veined white): 125062204
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Entry
125062204 CDS
T08706
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125062204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnap03019
]
125062204
Messenger RNA biogenesis [BR:
pnap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125062204
mRNA degradation factors
3'-5' decay
Pan complex
125062204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_CK
Motif
Other DBs
NCBI-GeneID:
125062204
NCBI-ProteinID:
XP_047523909
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Position
Z:complement(9785753..9801912)
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AA seq
589 aa
AA seq
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MDPSIYLPYSPPSLPQESKLMTYMNRNNVSTPTRSLNQSFNKLTLESSPPSARKVYVGEC
IPIKYYTSVAMLPESPSNTPPHLSAPQIHQENVGGTTYFYPTNDVNASLNTSGGLNSSGL
IGGSEHNMAVPSMAYPQMYAPIPASPIQGLGDTFYMPEQIRSEMQQIAQDPYTQPNARQC
QNLPNSLDDYTELLPLEELSPHSNTTSFRATHRIHGDQYALRRLHSYGTVPSKRFQSWKQ
IDHPNIIRLNHWFATRAFGDHSMVIVYDYHPASVTLMQRYLDGRTPGSNGAGNGSYHDPF
SSDPDAPRPYTHQKNAMLRAVAGGSLLPEAVLWSILVQLTAGLRAIHAAGLACRTLDPTK
VLTMGCRIRIAWCGVADALHANEIDINQAQQDDLTALGRLTLALACRTIHCDNLPLSIEL
VSRTYSVDLKNLIIYLLSAPRRSVTDLMPMIGARFYTQVEAFERRTDILESHLARELDNG
RMLRLLMKICFIIERPEFNRDHKWAETGNRYLLKLFRDYLFHSVTTEGRPWLDLSHVSNC
LNQLDSGTEIQVGLMTRDEGSVLLVTYAELKHCLEQAFAELMQVTPPSP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggatccatcaatttatttaccatatagtccaccttctctgccacaggagtcaaagttg
atgacatatatgaaccggaacaatgtttctacacctacaagatctttaaatcagtcattt
aataaactcacgttggagtcttctccgccatctgctagaaaggtttatgttggagaatgt
attccaatcaaatattatacatcagtagcaatgcttccagaatcaccatcaaatacacca
cctcacctatctgctccgcaaatacatcaggaaaatgttggtggtacaacatatttctat
cccacaaatgatgttaatgcgtctctcaatacttcaggtggacttaattcatctggtttg
ataggtggttcagaacataacatggctgtcccctccatggcatatccacaaatgtatgca
cctatacctgcatcaccaatacagggcttgggtgatacattttacatgcctgaacaaatt
cgctctgaaatgcagcaaatagctcaagacccatacacccaaccaaatgctcgccaatgt
caaaatctacctaatagcctggatgattatacagaattattaccgctggaagagttgtcc
ccacattcaaataccacatcttttcgagccactcataggatccatggtgatcaatatgct
ttgcgtcgtttgcactcatatgggacagtgccatctaagcgttttcaatcatggaaacag
attgatcatcctaatataatacgtctcaatcattggtttgcaacaagggcattcggggac
cactccatggtgattgtctatgattatcacccagcatcagttactctgatgcaaagatac
ctggatggtcggaccccgggtagcaatggtgctggcaatggttcataccatgatcctttc
tcatctgatccagatgctcctaggccctacacacaccagaaaaatgcgatgttgcgagct
gtggctggtggctctctactcccagaagctgtattgtggagtattctggtccaactaact
gctggtttgcgagccattcatgcagctggactggcttgcagaaccttggacccaactaaa
gttttgacaatgggatgcagaatccgcatagcttggtgcggtgtggcagacgcgttgcat
gctaatgaaattgatattaatcaggctcagcaagacgatttgacagccttgggcaggctt
acactggcacttgcatgtcgcactattcactgcgacaacttgcccttgtccatagaactt
gtatctaggacatactcggtggatctcaaaaatctaattatttatttactgtccgctccg
cgccgctccgttacagatctcatgccaatgattggagctaggttctacactcaggtagaa
gcatttgaacgacgtacagacattctggagagtcatcttgctagggagttggataatgga
cgcatgctacgtttgttgatgaaaatatgttttattattgaacgccccgagttcaataga
gaccataaatgggcagagacaggaaacagatacttacttaagctgtttcgtgattattta
ttccactcggtcactactgaaggccgaccctggcttgatttatctcatgtctcgaactgt
ctcaaccagcttgacagtggcactgagattcaggtgggtttgatgactcgcgatgaagga
agcgttttgctcgtgacgtacgctgagttaaagcactgcttggagcaagcttttgctgaa
ctgatgcaagtcacccctcccagcccataa
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