Pieris napi (green-veined white): 125063080
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Entry
125063080 CDS
T08706
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125063080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnap03400
]
125063080
DNA repair and recombination proteins [BR:
pnap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125063080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF373
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
125063080
NCBI-ProteinID:
XP_047525278
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Position
2:complement(8641524..8662351)
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AA seq
913 aa
AA seq
DB search
MSSLQPIQALNLDSVKQQAFVKYFNSLPEKPPTTVRIFDRNDYYSVHGADATTAAREVFS
SVSNIKKMGIEPNRQDYLVLSKGNFDILIKKLLLVRRYRVEIYASEGSSKNEWILKYKGS
PGCMSQLEEVLGEGFTNVNGCLIAVNIKTDAITKGRLIGVACVSGNDYQMSVSEFTDDDL
LTQLETVTVQMAPTECIIPQTENDDYKALKKVMERANITVTRLKKIDFSTEGLIQDLNRL
LKFKDSQVQDANAFPETRMSSAMLSLAAAIRYTSLVNDATNFGRFRLNSIKAESFLHLDA
AALSALNVLPELGDSNHAPTRSLYGLLDRCRTQQGKRLLAQWLRQPLRDINLINERLDIV
ELLVENSQLRLQLHEDHLRRIPDLQALARKLTRKKANLHDCYRIYQAIQRLPNLHQCLSE
SNSPTIKSSLAEPISELNDDLEKFQQMIEATVDMDAVDRGDFLVKPSFDEQLQLLHEQLE
NIQLSAEKELNKAAKDLDMDAKRSIKLENNPQNGFYFRVTLKEEQALRGNKKYTIIDAVK
GGVRFKTNALEAITEDYVQSKINYEKEQDKTVAEIIGIAAGYSECLFGLSHILSKLDVLV
SFAVAASTAPYPYTRPTITESLDEFVLRDVRHPCLEVQEGVSFIPNDVVFKRDSCLMHIV
TGANMGGKSTWMRSCGIVALLAHAGCLVPASSAKVPKLRALCARVGASDREEKGQSTFML
EMIESAAILRTATPDSLVLVDELGRGTSTYEGCGIAWAIAEKLATESKCFCLFATHYHEL
TRLPSLHPNVIVNSHAEACVVDSQLLLLHKIVPGPATHSLGLHVAKLADLPESIIEYAEA
KQAQLETNLFEIEASVKTQDTLEGQQLIEDFLRKCKKIQETVKSDTDMMSEINKMKEDLI
SSDSKYIKSLLTA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcttcaacccattcaggccctaaacctagactcagtcaagcagcaagccttt
gttaaatacttcaattcattacctgagaaacctcccacaactgtacgaatttttgatcgc
aatgactactacagtgtgcatggtgcggatgcaaccaccgctgcgagggaggtattttca
tcagtatccaacatcaagaagatgggcattgaacctaatcggcaagattatctcgtcctc
tcgaaagggaactttgatatattgattaagaagttattattggtccgtcgttaccgcgtt
gagatctacgcatctgaagggtcaagtaagaacgaatggatcctcaagtataaaggatcg
ccaggatgcatgtctcaactagaggaggtattgggtgaaggattcactaatgttaatggt
tgcttaattgccgtcaatatcaagactgatgctatcactaagggtcgcctcataggagtg
gcgtgtgtatcaggtaatgactaccaaatgtccgtctcggagttcaccgatgacgatttg
ctgacacaactagaaactgttactgtgcagatggcgcccactgaatgtattataccgcaa
actgaaaatgatgattacaaagcgctgaaaaaagtaatggaacgagccaatataacagtg
acaaggttgaaaaaaatagatttttctactgaaggtctgatacaggatctaaatcgtctt
ctaaagttcaaggattctcaagtgcaagatgctaatgcctttcccgaaacaagaatgtca
tcagccatgttgagcttagctgcagctataagatatacatcgctcgttaacgatgctact
aactttggaagatttcgcctaaactcaataaaagcagagagcttcctgcatttggatgcg
gctgcactcagcgcgttgaatgtgttacctgagctgggagactccaaccatgcgcctaca
agaagtttgtatggattactcgatagatgtcgcacccaacaaggaaaacggctcttagcc
caatggcttcgtcagcctctcagagatataaacctaatcaatgagcggttagatatcgta
gaattgttagtagagaactcacagctcagactacaattgcatgaagatcatttgcgaagg
atcccggatttgcaggccttagccaggaaacttacaaggaaaaaggcaaatttacatgac
tgttataggatatatcaggcaatacaaagattgccgaatcttcaccaatgtttgtcagag
tccaacagtccaactattaaatcttcattggccgaaccgatttccgagttgaatgacgat
ttagaaaagttccagcagatgattgaggctactgtcgacatggatgctgtggacagaggc
gatttcctagtaaaaccatcgtttgacgagcaacttcaattacttcatgaacaattggaa
aatatacagctgtccgccgaaaaagaactgaacaaggctgccaaagacctagacatggat
gccaaaaggtctatcaaacttgaaaataatccacaaaatggattttactttagggtaaca
ctaaaagaggaacaagctttacgtgggaacaaaaaatacactataatagacgcggtcaag
ggtggcgttaggttcaaaactaacgcattagaggccataacagaagactatgttcaaagt
aaaattaattatgaaaaggaacaagataaaacggtagcggagattattggtattgctgct
ggttattcagaatgtctcttcggtctctctcatattctatcaaagctagatgtgcttgtc
tctttcgcggttgcggcgtcaacagctccatacccatacactcggccaaccattacggaa
agcttggatgagttcgttctacgagatgtgagacatccatgtcttgaagtgcaagagggc
gtctctttcataccgaatgatgttgtttttaaacgagactcgtgtttaatgcacatagtg
acaggcgccaatatgggcggcaagtccacgtggatgcggtcttgtggcattgtggcgcta
ctggcacacgcgggctgtttggtcccggcctctagtgctaaggtgccaaaacttagggcc
ctttgtgcgagagtgggagcatctgatagagaggaaaaaggacagagcacttttatgttg
gagatgattgagtcggctgctattttaaggacggcaaccccggactcattagtactagta
gatgagcttgggcgcggtacatccacttatgaagggtgcggcatcgcctgggctattgct
gagaaactagcgacagaaagcaaatgtttctgcctcttcgcgacacattaccatgagctg
acccgattgccgagtctccatccgaatgtcatcgtgaattcacatgctgaagcctgcgta
gtggattcccaattgctacttttgcataaaatcgtccctggaccggcaacacattcactg
ggattgcatgtcgccaaattggccgatttaccggaatctattattgagtatgcagaagcc
aaacaggcccaactcgaaacaaatttatttgaaattgaggcttcagttaaaactcaagac
actttggagggacaacaattaatcgaagactttctacgaaaatgcaagaaaatacaagaa
actgtcaagtctgacacagacatgatgtcggaaattaataaaatgaaagaagatttaatt
agttctgacagcaaatacataaaatctttacttactgcgtga
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