Pieris napi (green-veined white): 125063548
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Entry
125063548 CDS
T08706
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
pnap
Pieris napi (green-veined white)
Pathway
pnap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125063548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnap03041
]
125063548
Spliceosome [BR:
pnap03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125063548
Complex C
U5 SnRNP specific factors
125063548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_16
TPR_17
HAT_Syf1_CNRKL1_C
FAT
ARM_TT21_2nd
TPR_CcmH_CycH
ARM_TT21_N
Iml2-TPR_39
TPR_21
TPR_12
ARM_TT21
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
125063548
NCBI-ProteinID:
XP_047526001
LinkDB
All DBs
Position
3:6737715..6752032
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AA seq
929 aa
AA seq
DB search
MSVPPQAFVNKNKKHFLGIPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPA
AKRKKNDEEDDDEDLNDSNYDEFSGYSGSLFSKDPYDKDDAEADAIYESIDKRMDEKRKE
YREKRLKEDLERYRQERPKIQQQFSDLKRELKMVSEDEWSAIPEVGDARNRKQRNPRAEK
FTPLPDSVLSRNLGGESTSSIDPTSGLASMMPGLATPGMLTPSGDLDLRKIGQARNTLMT
VKLSQASDSVTGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAW
IASARLEEVTGKIQAARNLIMKGCEVNPSSEELWLEAARLQPRDTARAVIAHAARNLPHS
VRVWVKAADLEQEPKAKRRVFRKALEHIPNSVRLWKAAVELENPEDARILLSRAVECCPT
SVELWLALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNTHMVEKIIDRAIS
SLSANGVEINREHWFKEAMEAEKSGAVNTCQAIIRAVIGHGIDPEDQKHTWMEDAEACAN
ENAYECARAVYGYALSVFPSKKSIWLRAAYLEKQHGSRSSLEALLQRAVAHCPKSEVLWL
MGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENKEYDRARRLLAKARASA
PTPRVMIKSAKLEWALNNCDEALKLLDEAIKVFSDYAKLHMMKGQIEEQLGRDDDAHNTY
TQGLKKCATSVPMWILLSRLEEKLKHVTKARSVLEKARLRNPKNAELWLESVRLERRNGS
AEIGNAVMAKALQECGNAGRLWAEAIFMESRPQRKTKSVDALKKCEHDAHVLLAVSQLFW
TERKLNKCREWFNRTVKIDPDLGDAWAFYYKFELLHGNEQQQEDVKNRCKTAEPHHGEYW
CQVSKEIANWCFSTEQILLLVAKNLPVPT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcctccacaagcatttgtaaataagaataaaaaacactttctcggtattcca
gcacctcttggatatgtagcaggtgttggtagaggtgctaccgggtttactactcgatct
gatattgggccagccagggatgccaatgatgtctctgatgaccgccatgctccaccagca
gcaaagagaaaaaaaaatgatgaagaagatgacgatgaagacttgaatgattccaattat
gatgagttttctggctacagtggatctttattttccaaggatccctatgacaaagatgat
gctgaagctgatgctatttatgaatcaattgataaacgaatggatgagaaaagaaaggaa
tacagagagaaacgtcttaaagaggacttggaaagatatcgtcaagagaggccaaaaata
cagcagcagttttccgatcttaaaagagaattaaagatggtatctgaagatgaatggtca
gctataccagaagtgggtgatgcacgaaacagaaagcaaaggaatccgagagctgagaag
tttacaccattaccagatagtgtactgtcacggaatctaggtggagagtcaacatcatct
attgatccaacatctggattggcgtccatgatgcctggcctggcaacacctggaatgtta
acaccttctggcgacctggatcttagaaaaataggtcaagcccgaaacactctcatgaca
gtaaagctgtcacaagcatcagattctgtcaccggacagactgtagttgatccaaaaggc
tatttaactgacctacaatccatgataccgacttatggaggagatattaatgatataaag
aaagccaggctcttgttgaaatcagttagagaaacaaatcctaatcacccaccggcttgg
attgccagtgctagattggaagaagttacaggaaagatccaagcggctcgtaaccttata
atgaagggttgcgaagttaatcccagtagtgaagagttgtggttggaagccgcccgttta
caaccccgggacacagcccgggctgttattgcgcatgcggcgcgtaatttaccacatagt
gttagagtttgggtcaaagctgccgatttggaacaggagcctaaggcgaaacgtcgtgta
ttccgcaaagcgttagaacacataccaaactccgtacggctttggaaagcggccgttgaa
ctggagaatccagaagacgctcgcattttactatcgagagcagtggaatgttgtcccaca
agtgtcgagttatggctagcattggctagattggaaacatacgaaaatgcaaggaaagta
ctgaataaggcccgggaaaatataccaacggatagacagatttgggtcaccgctgctaaa
ctggaagaagcgcatggtaacacacatatggtggagaaaatcatagatcgtgcgatttcg
tccctaagcgctaacggagttgagatcaaccgcgaacactggttcaaggaggccatggaa
gccgaaaaatctggcgctgttaatacttgtcaggcaattattcgggcggtaatcggacac
gggattgacccagaagatcaaaagcacacatggatggaggacgctgaagcgtgcgcaaac
gaaaatgcatatgagtgcgcccgagctgtttacgggtacgcgttatccgtattcccgtct
aagaagtcaatatggcttcgagcagcgtacttagaaaagcagcatggaagccgatcaagc
ctcgaggctttgctgcagagggccgtggcccattgccccaagtctgaagtgctttggctc
atgggggccaagtctaagtggttggctggggacgttccagctgctagaggtatcctatct
ttagctttccaagccaatcctaattcagaagagatctggttggccgcggtgaagttggag
agtgagaacaaagagtatgatagagcgagacggctgcttgctaaggctagggcatctgca
cctacacctagggttatgataaaatcagcgaaactggaatgggctcttaacaattgcgat
gaggcattgaagctattggatgaagctataaaggtgttcagtgattacgccaagttgcac
atgatgaaggggcagattgaggagcagctcggacgcgatgatgacgcccataacacttat
acgcaggggttgaagaaatgtgcgacgtccgttcctatgtggattttattatcaagacta
gaagaaaaactcaaacacgtcaccaaggcgaggtctgtactcgaaaaggcgagattaagg
aatccaaagaatgcggaattatggttagaaagtgtaaggctggaacgtcgcaatggaagc
gcggagatagggaacgccgtgatggcaaaagccttacaggagtgcggaaatgctggacgc
ctttgggctgaagcgatattcatggagtcaagaccgcagcggaaaaccaaaagtgtggat
gcgttaaaaaaatgcgaacacgacgcgcacgtacttctcgccgtgtcgcaactcttttgg
acggaacggaaacttaacaagtgtcgagagtggtttaatagaacggtaaaaattgacccg
gatttgggtgacgcatgggcgttttattacaaattcgaactccttcatggtaatgaacag
caacaggaagatgtcaaaaatcgatgtaagacagctgagcctcaccacggtgaatattgg
tgtcaagtgtcaaaagaaatagctaattggtgctttagtaccgaacaaatattattatta
gtcgctaagaatttacctgtaccaacgtaa
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