Pseudomonas nunensis: NK667_00305
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Entry
NK667_00305 CDS
T08997
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pnb
Pseudomonas nunensis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_00305 (phrB)
Enzymes [BR:
pnb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NK667_00305 (phrB)
DNA repair and recombination proteins [BR:
pnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NK667_00305 (phrB)
Prokaryotic type
NK667_00305 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UTO14844
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All DBs
Position
complement(60775..62220)
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AA seq
481 aa
AA seq
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MQLIWLRSDLRLHDNTALSAAAARGPSVAVYLLSPEQWLEHDDAPCKVDFWLRNLGELSL
ALGKLNIPLLIRTASRWDAAPKVLLDLCRELKIDAVHVNEEYGIHESRRDEAVAQTLKAE
GIDFYSYLDQLLFSPGTVLTKTGTYFQVFSQFRKVCYDRLRRSLPELVSAPGIQAPLKIS
SDEIPARVEGFDTPKDSLIALWPAGEAEARRRLDTFADAQIDYYQSERDFPAKPGTSQLS
AYLAAGVISPRQCLHTALQSNQGEFESGKVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRDAPDELAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDAEGVFIK
HWLPELAGLNKKEVHNPANVGGLFGIADYPSPIVNLSTSRQRALAAFKNLPSRQAAGGGY
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgacttgcgcctgcatgacaacaccgccctctcggca
gctgctgctcgcggcccgagcgtggcggtgtatctgttgagcccggagcaatggctggag
catgacgatgcgccgtgcaaagtggatttctggctgcgcaacctgggcgaattgagcctg
gcgctgggcaagctcaacattcccttgctgatccgcacagcgtctcgctgggatgcggcg
cctaaggttctgctcgacctgtgccgggagttgaagatcgacgcggtacacgtcaacgag
gaatacggcattcatgaaagccgtcgtgacgaagccgtggcccaaacattgaaggccgag
ggcatcgacttttatagctacctcgatcaactgttgttctcgccaggcaccgtgctgacc
aagaccggcacctacttccaggtgttcagtcagttccgcaaagtctgctatgaccggttg
cgccgctcactgcctgaactcgtgagcgcccccggcatccaggcgccgctgaaaatcagc
agcgatgaaatcccggcccgagtcgaaggtttcgacacgccgaaagacagcttgatcgcc
ctctggcccgccggtgaagccgaagcccggcgccgcctcgacacgtttgccgacgcgcaa
atcgattactaccagagcgagcgcgacttccctgccaagcctggcaccagtcaactttcg
gcttatcttgcggccggggtgatttccccacgccagtgtttgcacacggcgctgcaaagc
aatcagggcgagttcgaaagcggcaaggtcggcgcggtcacctggatcaacgaactgttg
tggcgcgaattctacaaacacatcctggtgggctacccacgggtttcccgtcatcgcgcc
tttcgcccggaaaccgaagcgctggcctggcgcgatgcgccggatgaactcgccgcgtgg
caagaagcccgcaccggcctgccgatcatcgacgcggccatgcgccaactgctggaaacc
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgaccaagaacctgctg
atcgactggcgtgaaggcgaacgctttttcatgcgtcacctgatcgacggcgatctggcg
gccaacaacggcggctggcagtggagttcgtccaccggcaccgactcggcgccctacttc
cgcatcttcaacccgctgagccagtcggaaaaattcgatgccgaaggtgtgttcatcaag
cactggctgccggaactcgccgggctgaataaaaaagaagtgcacaacccggcgaacgtg
ggcggcttgttcggcattgcggattacccctcgccgatcgtcaacctcagtacctcgcgc
cagcgcgccctggccgcgttcaagaacctgccatcgcgacaagcggccggaggcggctat
gagtga
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