Pseudomonas nunensis: NK667_00620
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Entry
NK667_00620 CDS
T08997
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00470
D-Amino acid metabolism
pnb00550
Peptidoglycan biosynthesis
pnb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NK667_00620 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NK667_00620 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
NK667_00620 (murD)
Enzymes [BR:
pnb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NK667_00620 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
Precursor biosynthesis
Amino acid ligase
NK667_00620 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UTO14903
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Position
127046..128392
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRENPPELATLKRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAATRGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLNAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDALSRPLMGEGQPCWTFGLSKPD
FKAFGIREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRDLDGVGYYNDSKATNVGAALAAIEGLGADIDGKVVLIAGGDGKGAE
FKELRDPVAANCRAVILMGRDSDKIGEAIGDAVPLIRVASLVEAVEQCRAAAHPGDVVLL
SPACASFDMFKNYEDRGHQFVRAVEDLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgccgtggccgatacgcgggaa
aatccaccggaactggccacgctcaagcgtgactatccgcacgtggaagtgcgttgtggc
gagctggacgtcgaattcctgtgccgtgccgacgagctctacgtgagccccggcctggcg
ctggcgaccccggccctgcaggctgccgccacccgtggcgtgaaattgtccggcgacatc
gagctgttcgcgcgtaacgcgaaagcgccaattgtcgccatcagcggttccaacgcgaaa
agcaccgtcaccaccctggtcggcgagatggccgctgcggcgggcaagcgtgtggcggtc
ggtggcaacctcggcacgccggcgctggacttgctcagcgacgacgtcgagttgtacgtg
atggaactgtcgagcttccagctcgaaaccaccgatcaactcaacgccgaagtggcgacc
gtgctcaacgtcagcgaagaccacatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccggatcttccgcggggccaaacagtttgtggtcaaccgtcaggacgccttg
agccgtccgttgatgggcgagggccagccatgctggaccttcggtttgagcaagcctgat
ttcaaggcatttggcatccgcgaagaagacggcgagaagtacttggccttcgaattccag
aacctgatgccggtgcgcgaattgaagattcgtggcgcgcataaccagtccaatgccctc
gcggcgctggcgctggggcatgccgtcggcctgccgttcgatgccatgttgtcgagcctg
cgcaccttcgctggcctcgaacatcgctgccaatgggtccgtgacctggacggcgtgggc
tactacaacgattccaaagccaccaacgtcggcgccgcactggccgccatcgaaggcctg
ggtgcggacatcgacggcaaagtcgtgctgatcgccggtggcgacggcaaaggtgccgag
ttcaaggaattgcgtgatccggtggcggccaactgccgcgccgtgattttgatgggccgc
gactccgacaagatcggtgaagccattggcgatgccgtgccgctgatccgtgtcgcttcg
ctggtcgaagccgtggagcaatgccgcgccgctgcgcaccccggtgacgtggtgctgttg
tcgccagcctgcgccagtttcgacatgttcaagaattatgaagaccgtggtcaccagttc
gtccgcgctgtggaggatctggcatga
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