Pseudomonas nunensis: NK667_01000
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Entry
NK667_01000 CDS
T08997
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00630
Glyoxylate and dicarboxylate metabolism
pnb00680
Methane metabolism
pnb01100
Metabolic pathways
pnb01120
Microbial metabolism in diverse environments
pnb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NK667_01000 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
NK667_01000 (fdhF)
Enzymes [BR:
pnb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NK667_01000 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_10
Fer2
Fer4_9
Fer4_6
Fer4_2
Fer4_15
Fer4_18
Fer4_4
Fer4_16
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
UTO14974
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All DBs
Position
complement(201095..203977)
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AA seq
960 aa
AA seq
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MITLFDPKTDIDLGTPARESQVQVTLNIDGRSISVPEGTSVMRAAALLGTTIPKLCATDS
LEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMSVHTQTPKLATLRRNVMELYISDHPLDC
LTCSANGNCELQTVAGQVGLREVRYGYEGENHLADVKDTSNPYFDYDPSKCIVCNRCVRA
CEETQGTFALTITGRGFESRVAAAGGDNFLDSECVSCGACVQACPTATLMEKSVVELGQP
ERSVITTCAYCGVGCSFRAEMKGDKLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRIT
KPMIRNHINDPWQEVSWDEAVTYAASEFRRLQQKYGRDSIGGITSSRCTNEETYLVQKLV
RAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMKADVILVMGANPSDAHPVF
ASQLKRRLREGARLIVIDPRRIDLVDSVHARAELHLALRPGTNVAMLNALAHTIVTEGLL
NQAFIDERCEGSDFARWSEFVSRPENSPEVLGAICGVDAGDIRAAARLYANAGNAAIYYG
LGITEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISNEVVRTQFEQAWNVTLQPDPGLRIPNMFEAALAGSFKGLYCQGEDIAQSDPNTQHVTA
ALSAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPLGGKAD
WEGTVALANALGYPMSYQHPSEIMDEIASLTPTFTNVSYAALDSHGSLQWPCNAAAPDGT
PTMHIEQFVRGKGRFMLTGYVPTEEKVNNRYPLLLTTGRILSQYNVGAQTRRTENVAWHD
EDRLKIHPTDAESRGINEGDWVGIGSRAGQTVLRARVTERVAPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVEVSRVYHPSEWQKRYQAFSDEQDRLLKDRRHARGAKAEVRR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccctcttcgacccgaaaaccgatatcgatctgggcaccccggcccgcgaaagt
caggtgcaggtcaccctgaacatcgacggtcgcagcatcagcgtgcccgaaggcacgtcg
gtgatgcgcgccgccgcgctgctcggcaccaccattcccaaactgtgcgccaccgacagc
cttgaagccttcggctcgtgccgcatgtgtctggtggaaatcgacgggatgcgcggttac
ccggcgtcctgcaccacgccggtcactgaaggcatgagcgtgcacacccagacgccgaaa
cttgccacgctgcggcgcaacgtcatggagctgtacatctccgatcacccgctggattgc
ctgacctgctcggccaacggcaactgcgagctgcaaaccgtggccggccaggttggcttg
cgggaagtgcgttacggctatgaaggcgagaatcatctggcggatgtgaaggacacgtcc
aacccctacttcgactacgacccgagcaagtgcatcgtctgcaaccgctgcgtgcgcgcc
tgcgaagaaacccagggcacgtttgcccttaccatcaccgggcgcggtttcgaatcccgg
gtcgcggcggccggtggcgataacttcctcgactcggaatgcgtgtcctgcggcgcctgt
gtgcaggcatgcccgaccgcgacgctgatggaaaaaagcgtggtcgaactgggtcagccc
gaacgcagcgtgatcacaacctgcgcctattgcggcgtcggctgttcgttccgcgccgag
atgaaaggcgacaaactggtgcgcatggttccggacaaaaacggccaggccaaccacggg
cactcctgcgtcaaaggacgttttgcctggggctacgccacgcacccggatcgcattacc
aaaccgatgatccgtaatcacatcaacgatccgtggcaggaagtcagttgggatgaagcg
gtgacctacgccgccagcgaattccgccggttgcagcaaaaatacggtcgcgactccatt
ggtggcatcacttctagccgctgcaccaacgaagaaacctacctcgtccaaaaactggtg
cgcgccgcgttcggcaacaacaacgtcgatacgtgtgcgcgggtctgccactcgccgacc
ggttatggcttgaaacaaacgttgggcgaatctgccggcacccagagtttcgattcggtc
atgaaggccgatgtgatcctggtgatgggcgccaacccgagcgacgcccacccggtgttc
gcttcccagctcaaacgccgcttgcgtgaaggcgcgcgactgatcgtgatcgacccacgg
cgcattgatctggtggactcggtgcacgcccgcgccgaactgcacctggccctgcgtccg
ggcaccaacgtcgccatgctcaacgcgctggcccacaccatcgttaccgaaggcctgctc
aaccaagcctttatcgatgagcgttgcgagggcagcgacttcgcacgctggagcgaattt
gtcagccgtccggaaaactcgccggaagtgcttggcgccatttgcggcgtagacgctggc
gacatccgtgccgccgcccgtttgtacgcgaacgccggcaatgccgcgatttactacggc
ttgggcatcaccgaacacagccagggcagcaccgctgtcatgggcatcgccaacctggcc
atggccaccggcaatatcgggcgcgaaggcgtcggcgtgaacccgctgcgtggacagaac
aacgtccagggttcctgcgacatgggttccttccctcacgagttgcccggctaccgccac
atctccaacgaagtggtgcgcacgcagttcgaacaggcatggaacgtcaccttgcaacct
gatccgggcctgcgcattccgaacatgtttgaagcggcactggccggcagtttcaaaggc
ttgtattgccaaggcgaagacatcgcgcaaagcgacccgaacacccagcacgtcaccgcc
gccctgtcggccatggaatgcgtggtggtgcaggacatcttcctcaacgaaaccgcgaag
tttgcccacgtgttcctgccgggcagttcgttcctggaaaaggacggcaccttcaccaac
gccgagcgccgcatctctcgcgtgcgcaaagtcatggaaccgctgggcggcaaagccgac
tgggaaggcacggtggcgttggccaacgcgttgggctatccaatgagctaccaacatccg
tcagaaatcatggatgaaatcgccagcctgacgccgaccttcaccaacgtcagctacgcc
gcgctggacagccacggcagcctgcaatggccgtgcaacgccgccgcgccggatggcacg
ccgaccatgcacatcgagcaatttgtgcgcggcaaggggcgcttcatgctcaccggctac
gtgcccaccgaagagaaggtcaacaatcgctatccgctgctgctgaccaccgggcgcatc
ctcagccagtacaacgtcggcgcgcagacccggcgcaccgagaacgtcgcctggcacgat
gaagatcgcctaaaaattcacccaaccgacgccgagagccgtggtatcaacgaaggcgat
tgggtcggtatcggcagccgcgccggccagaccgtgctgcgtgcgcgggttaccgaacgg
gtcgcgccgggcgtggtgtacaccacgttccacttcccggaatccggggccaacgtgatc
accaccgacaactccgactgggccaccaactgtccggagtacaaggtcacggcggtggaa
gtcagccgcgtctaccacccttcggaatggcaaaaacgctatcaggccttcagcgatgaa
caggatcgtttgctgaaagaccgtcggcatgcacgcggtgccaaagccgaggtgcgtcga
tga
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