Pseudomonas nunensis: NK667_02520
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Entry
NK667_02520 CDS
T08997
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00061
Fatty acid biosynthesis
pnb00071
Fatty acid degradation
pnb01100
Metabolic pathways
pnb01212
Fatty acid metabolism
pnb02024
Quorum sensing
pnb04146
Peroxisome
Module
pnb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NK667_02520 (fadD1)
00071 Fatty acid degradation
NK667_02520 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NK667_02520 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NK667_02520 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pnb01004
]
NK667_02520 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnb04147
]
NK667_02520 (fadD1)
Enzymes [BR:
pnb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NK667_02520 (fadD1)
Lipid biosynthesis proteins [BR:
pnb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NK667_02520 (fadD1)
Exosome [BR:
pnb04147
]
Exosomal proteins
Exosomal proteins of breast milk
NK667_02520 (fadD1)
Exosomal proteins of breast cancer cells
NK667_02520 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UTO15262
LinkDB
All DBs
Position
558232..559923
Genome browser
AA seq
563 aa
AA seq
DB search
MIEDFWKDKYPAGIAADINPDEYPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAQTVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSKGHGQPVAEANPDSGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLTAMVKELSKWK
FSGFVGLNTLFVALCNNEAFRKLDFSALKVTLSGGMALQLAAAERWKAVTGCGICEGYGM
TETSPVATVNPIQHIQIGTIGIPVPSTLCKVIDDAGVEQPLGEIGELCVKGPQVMKGYWQ
RQDATDEMLDSEGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKIFIVVKPGVTLTKETVMEHMRANVTGYKVPRSVEFRDALPT
TNVGKILRRELRDEELKKLGLKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtaccctgccgggattgctgccgacatcaatcca
gacgagtatccgaatattcaggcagtgttgaagcagtcctgccaacgcttcgctaacaaa
ccggcattcagcaacctgggcaagacaatcacctacggtgaactgtacgaattgtccggt
gcctttgccgcttacctgcagcagcataccgacttgcagcccggtgatcgaatcgccgtg
cagttgcccaacgtgttgcagtacccggtagccgttttcggtgcgattcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatggaacaccaattcaacgac
tccggtgccaaagccctggtctgcctggccaacatggcgcatctggcccagaccgtcgtg
ccgaaaaccggcgtcaagcacgtgatcgtcaccgaagtggccgacctgctgccaccgctc
aaacgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtcccggcgtatcac
ttgcccaaggccgtcaagttcaacgacgtgctgagcaagggccatggccagccagtggct
gaagccaacccggacagcggcgatgtcgcggtgctgcaatacaccggcggcaccaccggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggcgaacatgctgcagtgcaag
gcactgatgggttccaacctcaatgaaggttgcgagatcctgatcacgccgctgccgctg
tatcacatctacgccttcacctttcattgcatggcgatgatgctgatcggcaaccacaac
gtcctgatcagcaacccgcgcgacctcacggcgatggtcaaggaactgtcgaagtggaag
ttcagcggttttgttggcctgaacacgctgttcgtggcgctgtgcaataacgaagcgttc
cgcaagctggacttctcggcgctgaaagtcaccctgtccggcggcatggccctgcaactg
gccgcggccgagcgctggaaagcggtcaccggttgtggcatctgcgaaggttacggcatg
accgaaaccagcccggtggccacggtcaacccgatccagcacatccagatcggcaccatc
gggattccggtgccttcgaccctgtgcaaagtcatcgacgatgccggcgttgaacagccg
ctgggcgaaatcggtgagttgtgcgtgaaaggcccgcaagtcatgaagggctactggcag
cgccaggacgccaccgatgaaatgctcgacagcgagggctggttgaagaccggcgacatc
gcgctgatccagccggacggctacatgcgtattgtcgatcgcaagaaagacatgatcctg
gtctccggtttcaacgtgtacccgaatgagctcgaagacgtgctggcgaccctgccgggc
gtgctgcaatgcgcagccatcggcgtaccggacgagaagtcgggtgaggcgatcaagatc
ttcatcgtcgtcaagccgggcgtgaccctgaccaaggaaacggtgatggagcacatgcgc
gccaacgtcactggctacaaggtcccgcgctccgtggagttccgcgacgcgctgccgacc
accaacgtcggcaagatcctgcgtcgcgaactgcgtgacgaagagctgaagaagctgggc
ttgaagaagtaa
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