Pseudomonas nunensis: NK667_05220
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Entry
NK667_05220 CDS
T08997
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00550
Peptidoglycan biosynthesis
pnb01100
Metabolic pathways
pnb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NK667_05220 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NK667_05220 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
NK667_05220 (mrdA)
Enzymes [BR:
pnb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NK667_05220 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NK667_05220 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UTO15759
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Position
1130502..1132394
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLMACALFVVAITCALVVRMYVLQVVEFDYHSTISENNRVH
VLPITPTRGLIYDRNGVVLADNRPSFNLTITRERASDVKEELDEVVNLLHLPAEDRTLFD
KAMKQARHPFVPVTLFYELTEQQIAVLAVNEFRLPGLDVEPQFVRHYPMGAHFAHSIGYV
GRINEKESKTLDGVEYRGTQSIGKTGIEKFYESELHGHVGYEEVETNAQGRVLRVLKHTD
PTPGKNIVLSLDVHLQEAAEDALGDRRGSVVALDPSTGEVLAMVSKPSFDPNMFVTGISF
KEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVAPVDENPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAVGAQYRIAGKSG
TAQVVAIKQGERYNRAKTLERNRDNALFVGFAPAEHPKIVISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYATPAKPPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaccgataccgatcaaggatcacgaaaaagagacgcgcctggtcaataaaaga
ctgatggcctgcgccttgtttgtggtcgccatcacttgcgcgctggtagtgcgcatgtac
gtgctgcaagtggtcgaattcgattaccactcgaccatctccgaaaacaaccgcgtccac
gttttgccgatcaccccgacccgcgggctgatctatgaccgcaatggcgtggtcctggcg
gacaaccggcccagcttcaacctgactatcacccgcgaacgcgcctccgacgtcaaggaa
gagctggatgaggtggtcaatctcctgcacctgccggccgaagaccgcacgttgttcgac
aaggccatgaaacaggcacggcacccgttcgtcccggtgaccttgttctacgaactcacc
gaacagcagatcgccgttctcgcggtcaacgaattccgtctgccggggttggatgtcgag
ccgcagttcgtccgtcattacccgatgggcgcgcacttcgctcactcgatcggttacgtc
ggtcgtatcaacgagaaagaatccaagacgctggatggggtggagtatcgcgggacccaa
tccattggcaagaccggtatcgaaaaattctacgagtccgagctgcacggccacgtcggt
tacgaagaagtcgagaccaacgcccagggccgcgtactgcgcgtactcaagcacaccgat
ccgacccccggaaaaaacatcgtcctgagcctggatgtccaccttcaggaagccgccgag
gatgccctgggggatcgtcgcggttcggtggtcgctctcgatccatcgaccggcgaagtg
ctggccatggtcagcaagccaagcttcgacccgaacatgttcgtgaccggtatcagcttc
aaggaatatgcggcgctgcacgattccatcgaccggccgctgttcaaccgcgtcctgcgc
ggcctctatgcgccgggctcgaccatcaagccggaagtagcgattgctggcctcgattcc
ggcgtggtcaccccacagacccgcgtcttcgaccctggttactaccaactgccggacttc
gatcacaaataccgcaactggaaccacagcggcgatggctgggtagacatggacgcggcg
atcatgcgttccaacgacacctatttctatgacctggcgcacaagctgggcatcgaccgt
ctgcacgactacatggccatgttcgggctcggcgagaaagtctccctggacatgttcgaa
gagtctgccggcctgatgccgtcccaggcctggaagcgcgcgacgcgtcgtcagccatgg
ttcccgggtgaaaccgtgatcctcggcatcggccagggctacatgcaggtcacgccactg
caactggcccaggccaccgcgttgattgccaataaaggtgtgtggaaccgaccgcacctg
gccaagaccgtcgacggtgtggcgccggtggatgagaacccgatgccgaacatcctgctc
aaggatccgcgtgattgggagcaggtcaaccacggtatgcaaatggtgatgcacgacgcg
cgcgggattgcccgggcagcggcggtgggtgcccaataccgcatcgccggcaagagtggt
accgcgcaggtggtcgcgatcaagcagggcgagcgttacaaccgggcgaaaaccctggag
cgtaaccgcgacaacgccttgttcgtcggtttcgccccggccgaacatccgaagattgtg
atctcggtgatgatcgaaaacggcgaggccggtggtcgcgttgccgggcctgtggtgcgg
cagatcatggacgcctggctacttgatcaggacggccatctcaagccgcaatacgccacg
cccgccaaaccaccgggcgatccccacgtctaa
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