Pseudomonas nunensis: NK667_05285
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Entry
NK667_05285 CDS
T08997
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pnb
Pseudomonas nunensis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnb03000
]
NK667_05285
Transcription factors [BR:
pnb03000
]
Prokaryotic type
Helix-turn-helix
Other families
NK667_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
HTH_30
Mg_chelatase
HTH_1
AAA_2
AAA
HTH_7
HTH_28
HTH_22
HTH_23
HTH_29
HTH_20
DUF134
Mga
AAA_7
Diguanyl_cycl_sensor
HTH_11
PAS_9
HTH_17
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UTO15771
UniProt:
A0ABY5EJ61
LinkDB
All DBs
Position
1144067..1145971
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AA seq
634 aa
AA seq
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MTLIKTTHPKPHQEARLAREKLHLEGEVPDGVLRAEIDASWRRSLSHGVHFNGKHELTLE
SSASLEVLLASNRLLIDAAMPAIDYLAERQGKEGLIILANSDATILAVEGRADRLKGSGL
QDITLGACWSEAARGTNALGTALVEARPTLIDCGEHYLDRLSDFSCTSVPIHCPQGDILG
VLDLTREGPLGRVHDSTALLAMAVSQIESRVFNASYPDQIVLAFHSRRQYLESPWQGLLA
VSLGGQILAVSAQACQLLRAERSALVGHRCEEFLGVDGLQLLARLQQGGVGSLQTAKGEF
FYKTLRAPQRSINVGTTPRPVAKPAKPQPDLESLAGSNVRYARALRMARQGLANELPVLL
LGETGTGKEVIARALHMAGTRCDKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMV
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALICATHRDLK
RLVEDKHFREDLFYRVNGISVMLPALREREDFSGLVGRLLAKLDAPTVTLHDDLSKLLGG
YHWPGNIRQLEMVLRTALAMREAGDSVLTLDHLPDSMLDDLTATERPQAGSIRENELELI
RQSLDAHQGNVSAAADALGISRATLYRKLKQLRL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacactcataaaaacaacacaccccaagccccatcaggaagcccggctggcccgggaa
aagcttcacctcgaaggcgaagtccccgatggcgtattgcgtgcggaaatcgacgcctca
tggcggcgcagcctgagccacggcgtgcatttcaacggcaagcacgagctgacgctggaa
tcgagcgccagcctcgaagtgctgctggccagcaaccgcttgctgatcgacgccgcgatg
ccggccatcgattacctggccgaacgccaaggcaaagaaggcctgatcatcctcgccaac
tccgacgcgaccatcctcgccgtcgaaggccgcgccgatcgcctcaagggctccggcttg
caagacatcaccctcggcgcctgctggagcgaagccgcgcgcggcaccaatgccctcggc
accgcgctggtggaagctcggccgaccctgatcgattgcggcgaacattaccttgatcgc
ctgagcgatttctcctgcacttcggtgccgattcattgcccgcaaggcgatatccttggc
gtcctcgacctgacccgcgaaggcccgctcggtcgcgtccacgacagcaccgcgctgctg
gccatggcggtcagccagatcgaaagccgagtattcaatgccagttatccagaccagatc
gtcctcgccttccacagccgtcggcagtacctcgaatccccatggcagggtctgttggca
gtgagcctcggcgggcaaattctcgcggtcagcgcccaggcctgccagttgctgcgcgcc
gagcgttcggcgttggtcgggcatcgctgcgaagagtttctcggcgtcgatggcctgcaa
ctgctggcgcggctgcaacagggcggcgtcggcagtctgcaaaccgccaagggcgaattc
ttctacaaaaccctgcgcgcgccccagcgttcgatcaacgtcggcaccacgccacgcccg
gtcgcgaaaccggccaaaccgcaaccggatctcgaatccctggccggcagcaatgtgcgt
tacgcccgcgccttgcgcatggcccggcaaggtctggccaatgaactgccagtgttgctg
cttggcgaaaccggcaccggtaaagaggtgatagcccgcgccctgcacatggccggcacc
cgctgcgacaaacccttcgtcgcggtgaattgcgcggcgattcccgaaggcctgatcgag
tcggaactgttcggctaccgcgaaggagcgttcaccggttcccgccgtggcggcatggtc
ggacgcctgcaacaggcccatggcggcaccttgttcctcgatgaaatcggcgacatgcca
ttggccttgcaggcgcggttgttgcgcgtgttgcaggaccgcaaagtcgcgccactgggc
gccggcgaagagcaggacatcgacgtcgcgctgatctgcgccacccaccgcgacctcaag
cgtctggtggaggacaaacactttcgcgaagacttgttctaccgggtcaacggcatcagc
gtgatgctcccggccctgcgcgaacgcgaggatttcagcggcctggtcggtcgcttgctg
gccaagctcgacgccccgacggtcaccctgcatgacgacctgagcaaattgctcggcggc
tatcactggccgggcaacatccgccaattggagatggtcctgcgcaccgcgttggccatg
cgcgaggcgggcgatagcgtgctcaccctcgaccatttgcccgacagcatgctcgacgac
ctgaccgccaccgagcgcccccaggccggcagcattcgcgaaaatgaactggagctgatc
cgccaatccctggacgcgcatcagggcaacgtctccgccgccgccgacgccctcggcatc
agccgcgcaaccctgtaccgcaaactcaaacagttgcgcctgtga
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