Pseudomonas nunensis: NK667_05645
Help
Entry
NK667_05645 CDS
T08997
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00300
Lysine biosynthesis
pnb00470
D-Amino acid metabolism
pnb01100
Metabolic pathways
pnb01110
Biosynthesis of secondary metabolites
pnb01120
Microbial metabolism in diverse environments
pnb01230
Biosynthesis of amino acids
Module
pnb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NK667_05645
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NK667_05645
Enzymes [BR:
pnb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NK667_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UTO15836
UniProt:
A0ABY5EKK1
LinkDB
All DBs
Position
1266259..1267251
Genome browser
AA seq
330 aa
AA seq
DB search
MARFYDARGNIYAVVTPEAVRGVGIRLPATAQASALTRDTWSRAAVDAFCEWPQGMRPDG
AKEHRCDGLLIGPFQATPPFDLLIVNTDGTLVERSGNGLTIFSQALGEHGLLPGEEPCLL
RVHHDKSDAVSPVETSVKPAEVDGVQGFWLDLGKPSFGAQAVGALGVESVMLNDRDVSHV
QPLSVLERAWCRSQFVRIGNPHCVTLVTNAEALPDNEQMREPGLSEGLTRIAYAMPTGAG
QPCVAGVNLQWAMLESEGRIVARVFERGEGPTASSGTSASAVASAAWRVGWVAVGEVKVV
MPGGTAPILLEEQGGELSRVRLFGTARLMD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttctatgatgcacggggcaatatttatgcggtggtgacgcccgaggcggtg
cgcggcgttggcatccgcttgcctgcaacagcccaggcgtcggcgctgacaagagacacc
tggagtcgcgcggcagtggatgcgttttgcgagtggccgcagggaatgcgcccggatggc
gcgaaggagcatcgctgtgacggcctgctgatcggtccgtttcaagccacgccacccttt
gacctgttgatcgtcaataccgatggcaccctggtcgagcgcagtggcaatggcttgacg
attttctctcaggcgctcggtgaacacgggttgctgccaggcgaggagccttgtttgttg
cgggttcaccacgataaaagcgacgcggtttctcctgtggaaacttccgtgaaaccggcc
gaggtcgatggcgtacaaggtttttggctggaccttggaaagccttcgttcggagcgcaa
gcggtgggtgcgttgggcgttgaaagcgtgatgttgaacgaccgtgacgtcagccatgtg
caaccgttgtcagtgctcgagcgggcgtggtgccgcagccagtttgtgcggattggcaat
ccccattgcgtaacgctggtcaccaacgccgaggccttgccggacaacgagcagatgcgt
gaaccgggtttgtctgaagggctgacgcgtatcgcctacgccatgccgaccggggcaggg
cagccgtgtgtggcgggggtgaatctgcaatgggcgatgcttgagtctgaaggaaggatc
gtcgcgcgggtgtttgagcgcggggaagggccgacggcatcgtcaggcaccagcgccagt
gcggtggctagcgcggcttggcgggtggggtgggtagcagtgggtgaagtgaaagtggtt
atgcctggtgggacggcgccgattcttttggaagagcagggcggtgaattgagtcgggtg
aggttgtttggtacggcgcggttgatggattga
DBGET
integrated database retrieval system