Pseudomonas nunensis: NK667_10040
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Entry
NK667_10040 CDS
T08997
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pnb
Pseudomonas nunensis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnb03032
]
NK667_10040
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_10040
Enzymes [BR:
pnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NK667_10040
DNA replication proteins [BR:
pnb03032
]
Prokaryotic type
DNA Topoisomerases
NK667_10040
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NK667_10040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
UTO16665
LinkDB
All DBs
Position
complement(2346219..2347256)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDSALIDVLPPDLHYVDDTQPGITRKKLRGKFCYFDPAGQRITDPDEIKRINALAVPPA
YIDVWISADPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLRDFGLALPKLRKQLE
ALLEAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRNRHVEVNGSAILFQ
FRGKSGVEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHTVTSSDVNAYLQTLTG
ADFTAKDYRTWAGSALALAVLRELHWEPESDAKRHVVEMVKNVAKQLGNTPAVCRKCYIH
PAVLDGFLLGALAELPRPRVRKGLRAEEVGLAIFLEKMVAAAEKS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccgcgctgatcgatgtgttgccgcccgacctgcattacgtcgatgacacc
cagcccggcattacccgcaagaaactgcgcggcaagttctgttatttcgatccggcgggc
cagcgcatcaccgatcccgacgaaatcaagcgcatcaacgctcttgcggtgccaccggcc
tacatcgacgtgtggatcagcgccgacccgcgcggccatctgcaagccaccggccgcgat
gcccggggccgcaagcaataccgttatcacgcacgctggcgcgaagtgcgcgatgccgac
aaatattcgcggctgcgcgacttcggccttgccctgccaaaactgcgcaagcaactggaa
gccctgctggaggcgccgggtttcagccgcgacaaggtcatggccacagtcatcaccttg
ctcgacgcaacgctgatccgcgtcggcaacactcaatatgcacgggacaaccgttcctat
ggcctgaccaccctgcgcaaccggcacgtcgaggtgaatggcagtgcaatcctgttccag
tttcgcggcaagagtggcgtcgaacaccagatcaccgtgaaagaccggcgcctggcgcgg
atcatcaagcgctgcctggaaatccccgggcaaaacctgtttcagtacctcgacgaaaac
ggcgagcgacacaccgttacttcctccgacgtgaatgcctacctgcaaaccctcaccggc
gccgattttaccgccaaggactaccgcacctgggccggcagcgcactggcgttggcggtg
ttgcgcgaactgcattgggagccggaatccgacgccaagcgacatgtggtggagatggtc
aagaacgtcgccaaacaactgggcaacaccccggcggtgtgccgcaagtgctacatccac
ccggcggttctggatggatttttgctcggcgccttggctgagctgccccggccacgggtg
cgcaaaggactcagggccgaagaggtcgggctcgcgatctttctcgagaaaatggtcgcc
gctgccgaaaaatcgtga
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