Pseudomonas nunensis: NK667_16880
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Entry
NK667_16880 CDS
T08997
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NK667_16880 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_16880 (uvrB)
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NK667_16880 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NK667_16880 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UTO11856
UniProt:
A0ABY5E7V3
LinkDB
All DBs
Position
complement(3917889..3919904)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVEKISAFDPLTGEVTRQLPRF
TFYPKSHYVTPRETLLGAIEGIKVELQERLDYLRTNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGQAPPTLFDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEFENISPQTIFVSATPGNYEAEHAGRVVEQLVRPTGLVDPQ
IEIRPALTQVDDLLSEIGKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYEAELRSPGEVAKRIKALEEKMYALARDLEFEAAAQMRDE
IGKLRERLISV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattccagctagtcacccgcttcgagcccgccggcgatcagccggaagccatc
cgcctgatggtcgagggcatcgaagccgggctggcgcaccagacgttgctcggtgtgacc
ggttcgggcaagaccttcagcatcgccaacgtaatcgcccaggtgcagcgtccgactctg
gtgctggcgccgaacaaaaccctggccgcgcagttgtacggcgagttcaaggcattcttc
ccgaacaacgccgtcgaatacttcgtttcctattacgactactaccagcccgaagcctat
gtgccgtcgtcggacaccttcattgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgactctccgcgaccaaggcgctgctggagcgcaaagacgccatcatcgtcaccacg
gtgtcgtgcatctacggtctgggcagcccggaaacctatctgaaaatggtcttgcacgtg
gatcgcggcgacaagctcgatcaacgcgccttgctgcgccgtctggcggacctgcagtac
acccgcaatgacatggatttcgcccgggctacgttccgtgtacgcggcgacgtgatcgat
atccacccggcggaatccgatttcgaagcgatccgcatcgagcttttcgatgacgaagtg
gagaaaatttccgcgttcgatccgctgaccggcgaagtcacccggcagttgccgcggttc
acgttctatccgaaaagccactacgtgacgccacgggaaaccctgctcggcgccatcgaa
gggatcaaggtcgagcttcaggagcgcctggattacctgcgcaccaacaacaaattggtg
gaagcccagcgtctggagcagcgaacccgttttgacctggaaatgattctggagctgggt
tactgcaacggcatcgaaaactactcgcgctacctgtcgggccgtgaatccggtcaggcg
ccgccaaccttgttcgactacctgccggccgacgctttgctggtaatcgacgaatcccac
gtcagcgtgccgcaggttggcgctatgtataagggcgaccgctcgcgtaaagagacgttg
gtggaatacggtttccgcctgccgtcagcgctggataaccggccgatgcgtttcgacgag
ttcgaaaacatcagcccgcagacgatttttgtctcggccacaccgggcaactacgaagcg
gaacacgccggtcgcgtggtcgagcaactggtgcgtccgaccggtctggtggacccgcaa
atcgaaatccgtccggcgctgacccaggtcgacgatctgctctcggaaatcggcaagcgc
gtggccctggaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacttg
accgattacctggctgaccacggcgtgcgagtgcgttatttgcactcggacatcgacacg
gtcgaacgggtcgaaatcatccgcgacttgcgcctcggcaccttcgacgtgctggtgggg
atcaacctgctgcgtgaaggcctggacatgccggaagtgtcgctggtggcgattctcgat
gcggacaaggaaggcttcctgcgttccgagcgctcgctgatccagaccatcggccgggcg
gcgcgtaacctcaatggccgcgcgattctgtatgccgaccggattaccggctccatggag
cgggcaatcggcgagaccgagcgccgtcgcgacaagcaaattgcgttcaacctggccaac
ggcatcacgcctaaaggtgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaaaggcatggccaaggctgcggaggagagcgccaag
tacgaagccgaattgcgttcgccgggcgaagtcgccaagcgcatcaaggcgctggaagag
aagatgtacgcgttggcacgggatctggaattcgaagcggcggcgcagatgcgcgatgag
attggcaagttgcgggagcggttgatctctgtctga
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integrated database retrieval system
