Pseudomonas nunensis: NK667_17025
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Entry
NK667_17025 CDS
T08997
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pnb
Pseudomonas nunensis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnb01002
]
NK667_17025
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
NK667_17025
Peptidases and inhibitors [BR:
pnb01002
]
Cysteine peptidases
Family C82
NK667_17025
Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NK667_17025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UTO11884
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All DBs
Position
complement(3940319..3942052)
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AA seq
577 aa
AA seq
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MRQLSRLFVISHVFFMGFLISGTAVAETSPIAPENPSISMIEAIPDDNVAQEIHAVLEPM
ISAFPPLQTRPRHQRIDVNRVVLDFYTHRQFRAAWTNPDDVAQLLKSLNDTQIDGLEPAD
FRGDDLAMAQASMQNTAPTPAQQAAFDLAATRTYLTALLQLRRGKVDPARLDMHWNFDIT
GADPRDDVNNFFIALDTHDVASAFAQAPPQEAVYVGLREALAQLRTIRDRGGWPKITEGQ
SLKPGMDGPAVAQLRARLAAGGYLDSKHSKNNEYDDAVIAAVKKYQTEQYLGADGVAGAT
TLAALNVPVQARIDQVRVNMERARWLLYKLQGTFVIVDIAGYKVALYRDGQPVWRSRVQV
GKPFRSTPIFQAEITYVTFNPTWTVPPTILKEDVLPKILSNPNYLSANRIRPLDREGNVL
DPATIDWSHPQGITLRQDAGPENSLGQVVIRFPNDYAIYLHDTPHRELFAKNVRATSSGC
IRVENPLQLVELLFNDPVRWNSAGIQKQLANGKTENIRLPVKVPVLLAYWTVDMGSNGRV
AFKPDVYGYDNPVLKALNSPAKLPALDLQAAVGQVRP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactatcaaggttattcgtcataagccatgtcttttttatgggctttctgatc
agcggcacggccgtcgctgaaacttcgccgatcgcgccggaaaatccgtcgatcagcatg
atcgaggcgatacccgacgataacgtcgcccaggagattcatgcagtgctggagccgatg
atttcggcattcccgccgttgcagacccggccgcgtcatcagcgcatcgacgttaaccgc
gtggtgctggatttctatacccatcgccaattccgtgcggcgtggaccaaccctgatgat
gtcgcccagttgctgaaaagcctcaacgacacgcaaatcgatggcctggagcctgcggat
tttcgtggcgatgatttggccatggctcaggcgtcgatgcagaacacggcgccgacgccg
gcccagcaagctgccttcgacctcgcggcaacccgcacttacctcacggcattgctgcaa
ttgcgccggggcaaggttgaccctgcgcggctggacatgcattggaatttcgacattact
ggcgccgaccctcgggacgacgtgaataacttcttcatcgcgctcgacacccatgatgtc
gctagcgcctttgcgcaagcgccgccgcaagaggcggtgtacgtcggtttgcgtgaagcc
ttggcgcagttgcgcacgattcgcgaccgtggcggctggccgaaaatcaccgaagggcaa
tcgctcaagccaggaatggacggccccgccgtggcgcagttgcgcgcgcggttggcggcg
ggcggttacctggactcgaaacacagcaaaaacaatgaatacgacgatgccgtgatcgcc
gccgtgaaaaagtaccagaccgaacagtacctgggcgcggacggcgtggccggtgcgacg
accctcgcggcgttgaacgtgccggtgcaggcgcgcatcgatcaggtgcgggtcaacatg
gagcgcgcgcgctggctgctttataaactgcagggcacgttcgttattgtcgatatcgcc
gggtacaaagtggcgctgtatcgcgatggccaacccgtctggcgttcccgggtgcaggtc
ggtaaaccgtttcgcagtacgccgatctttcaggccgagattacttacgtcacgttcaac
ccaacatggaccgtgccgccaacgattctgaaagaagatgtgttgccgaagattttgagc
aacccgaattacctcagtgccaaccgcattcgtccgctggatcgggaaggcaatgtgctg
gatccggcgaccatcgactggagtcatccgcagggcattactttgcgccaggatgccggg
ccggaaaactcgctgggccaggtggttattcgcttcccgaatgactatgcgatttacctg
cacgacacaccgcaccgggagttgttcgcgaagaacgtccgcgccaccagttcgggctgt
attcgggtggagaacccattgcagttggtcgagttgctgtttaacgatccggtgcgctgg
aacagcgccgggattcaaaagcaactggccaatggcaagaccgagaacattcgcttgccg
gtgaaagtgccggtgttgttggcgtattggacggtggacatgggcagcaacgggcgagtg
gcgtttaaaccggatgtgtatggctacgataatccagtgttgaaagcgctgaattcgccg
gcgaagttgccggcgctggatttgcaggcggcggtggggcaagtcaggccgtaa
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