Pseudomonas nunensis: NK667_17565
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Entry
NK667_17565 CDS
T08997
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00071
Fatty acid degradation
pnb00280
Valine, leucine and isoleucine degradation
pnb00310
Lysine degradation
pnb00362
Benzoate degradation
pnb00380
Tryptophan metabolism
pnb00410
beta-Alanine metabolism
pnb00640
Propanoate metabolism
pnb00650
Butanoate metabolism
pnb00907
Pinene, camphor and geraniol degradation
pnb00930
Caprolactam degradation
pnb01100
Metabolic pathways
pnb01110
Biosynthesis of secondary metabolites
pnb01120
Microbial metabolism in diverse environments
pnb01200
Carbon metabolism
pnb01212
Fatty acid metabolism
Module
pnb_M00087
beta-Oxidation
pnb_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NK667_17565 (fadB)
00650 Butanoate metabolism
NK667_17565 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NK667_17565 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NK667_17565 (fadB)
00310 Lysine degradation
NK667_17565 (fadB)
00380 Tryptophan metabolism
NK667_17565 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NK667_17565 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NK667_17565 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NK667_17565 (fadB)
00930 Caprolactam degradation
NK667_17565 (fadB)
Enzymes [BR:
pnb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NK667_17565 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NK667_17565 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NK667_17565 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NK667_17565 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
Motif
Other DBs
NCBI-ProteinID:
UTO11983
LinkDB
All DBs
Position
complement(4046645..4048792)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGHVK
EDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgagaacttcaagctg
cctgatgcagagcttgtcgctggcaacctcgaagccaacaagattttcagcgatttcgaa
gacctcaatgtcccgacggtcgccgcgatcaacggtatcgccctgggcggcggtctggaa
atgtgcctggcggcggactaccgcgtcatgtccaccaaggccaagatcggtctgccggaa
gtcaaactgggcatctacccgggcttcggcggcaccgtgcgcctgccgcgcatcatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgcgctg
aaagtcggcgcagtggacgcagtggttgcacctgagaaactgcaggaagccgccctggaa
ctgatcaagcgcgccatctccggtgagtttgactacaaggccaagcgtcagccgaagctg
gaaaagctgaaactgaacgccatcgaacaaatgatggctttcgaaaccgccaaaggtttc
gtggccggtcaggctggcccgaactacccggcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcactggaagtcgaagccgccggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgctcgcgacgtgaagcaggctgccgtattg
ggcgccggtatcatgggtggcggtatcgcttatcagtcggcttccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggcctggctgaagccgccaagctg
ctggtcggtcgcgttgataaaggtcgcatgaccccggcgaaaatggctgaagtgctcaac
ggcattcgtccaaccctgtcctacggtgacttcggtcacgtggatctggtggtcgaagcg
gtcgtcgagaaccctaaggtcaagcaagccgtactggccgaagtcgaaggtcacgtcaaa
gaggacaccatcctcgcgtccaacacttcgaccatttccatcaccttgctggccaaagcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgatccgtggcgagaagtccagcgaactggcggttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccaatgggcccggcatacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgatcgccgttcggctatcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaaggggttctacgcttacgagaccgacaagaagggcaagcag
aagaaagtcgccgacccgtcggtgctggaagtgctcaagccgatcgtttacgagcagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtt
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagactggccaacggttcttcggttaa
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