Pseudomonas nunensis: NK667_17915
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Entry
NK667_17915 CDS
T08997
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00550
Peptidoglycan biosynthesis
pnb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NK667_17915 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnb01002
]
NK667_17915 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
NK667_17915 (dacB)
Enzymes [BR:
pnb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NK667_17915 (dacB)
Peptidases and inhibitors [BR:
pnb01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
NK667_17915 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pnb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NK667_17915 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
LppX_LprAFG
Motif
Other DBs
NCBI-ProteinID:
UTO12052
UniProt:
A0ABY5ECJ6
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All DBs
Position
4130348..4131808
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AA seq
486 aa
AA seq
DB search
MIKSLRPLLLASLLLPLALPVSAAQINTSLTPNVEKALKASKLQDSALSLVMLPLDGPGT
PTIFNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYTDGTLSGGILNGNLYLKGGGD
PKLNMEKLWLLMRDLRANGVTQVTGNLVLDRSFFVQPQLPEFNDDGNDENKPFLVKPDSL
MVNLKALRFVARNDNGKVLVSVEPPIATINIDNQVKAINSKQCTGGVRYNPVTQADGSVT
VTVGGQLGDGCSSQTYLSLLDHATYTAGAVRAIWKELGGSIQGKDVLGATPKDAKVLARA
FSPDLAEIIRDINKYSNNTMAQQLFLSLGQKFRNDADGDDAKAAQRIVRQWLAQKGITAP
HLVMENGSGLSRAERVSAREMAGMLQAAWHSPYAAEFISSLPIAGTDGTMRKRLKTTAMR
GEAHIKTGTLNTVRAISGFSRDVNGNTWAVVAILNDKAPFGASSVLDQVLLDLYRQPKVA
ATASVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatctttgcgtccactgttactcgccagtcttcttctgcccctggccctcccg
gtttccgctgctcagatcaatacctcgctgacgcccaacgttgaaaaagccctcaaggcc
agcaagttgcaggacagcgccctgtccctggtgatgctcccgctcgacggccccggcacc
ccgaccattttcaacgcagacgtctcagtcaacccggcctcgaccatgaaactggtcacc
acgtatgcagccctggaaatgctcggcccgaatcatcagtggaaaaccgagttctacacc
gacggcaccctcagcggcggcatcctcaatggcaacctctacctcaagggtggcggcgat
ccgaagctgaacatggaaaaactctggctgctgatgcgcgacctgcgggccaacggcgtg
acgcaagtcaccggcaacctggtgctcgatcgcagcttcttcgtgcagccgcaactgccg
gaattcaatgacgacggcaatgacgagaacaaaccgttcctggtcaaacccgactcgctg
atggtcaacctcaaggctttgcgcttcgtggcgcgcaacgacaacggcaaggtgctggtg
tcggtggagccgccgattgcgacgatcaacatcgacaatcaggtcaaggcgatcaattcc
aagcaatgcaccggtggcgtgcgctacaacccggtgacccaggccgatggcagcgtgacc
gtgacggtcggcggccaattgggcgacggttgcagctcgcagacctacctgtcgctgctc
gaccacgcgacctacaccgccggcgccgtgcgggcgatctggaaagaactgggtggcagc
atccagggcaaggatgtgctgggagcgacgccaaaagacgccaaggtgctggcgcgagcg
ttctcgccggacctggcggaaatcattcgcgacatcaacaaatacagtaacaacaccatg
gctcagcagttgttcctgagcctgggccagaagtttcgcaatgatgccgatggcgatgat
gccaaggctgcccaacgcatcgtgcgtcagtggctggcccagaaaggcatcaccgcgccg
cacctggtgatggagaacggttccggcctgtcccgcgccgaacgggtgagcgcgcgtgaa
atggccggcatgctgcaagccgcatggcacagcccgtacgccgccgagttcatcagctcg
ctgccgatcgccggcaccgacggcaccatgcgcaaacgcctgaagaccaccgccatgcgc
ggcgaagcgcacatcaagaccggcaccctgaacaccgtgcgcgcgatctccggcttcagc
cgcgacgtcaatggcaacacctgggcggtggtggcgatcctcaacgacaaggcaccgttt
ggcgcttcttctgtgttggatcaggtgctgctggacctgtatcgccagcctaaggtggcg
gcaacggcttcggtgttgtaa
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