Pseudomonas nunensis: NK667_19610
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Entry
NK667_19610 CDS
T08997
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NK667_19610 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnb03019
]
NK667_19610 (recQ)
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_19610 (recQ)
Enzymes [BR:
pnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK667_19610 (recQ)
Messenger RNA biogenesis [BR:
pnb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NK667_19610 (recQ)
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NK667_19610 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UTO12371
LinkDB
All DBs
Position
complement(4480994..4483120)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVANGGDALVLMPTGGGKSLCFQVPALLREGLA
VVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPNVPRIALTATADKRT
REEIVDRLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKK
VDEVAVFLSEQGFPALPYHAGLPNETRAHHQKRFLNEEGLIMVATVAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRGGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQALSAIYRTG
QRYGVGHLVDVLLGKDNEKVRSFGHQHLSVYGVGKAMGESEWRSLFRQLVARGLADIDLE
GYGGLRLSDTCRPLLKGEVTLELRRDLKPQTTAKSSKSQASQLVRGEEREQWEALRALRR
KLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMATVSGVGARKLERYGEAFLEVLGGQVE
APKVVADVRHELITLARAGMTPLQIAGQLQCTEKNVYTMLAEAIGKQQLSLEQALDLPEE
LMGEIQDAFLDGEGELPPVAEIAALFAGRVPEGVLYCVRAALQSEFEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcaacgcgtcctcaaggacatcttcggctacgacagtttccgtggc
cgccagggtgcaatcattgagcgcgtggccaatggcggcgacgctttggtattgatgcct
accggtggcggcaagtccctgtgcttccaggtcccggcgctgctgcgcgaaggtctggcg
gtggtggtgtcgccgctgatcgcgttgatggacgaccaggtcgcgaccctcgaagaactg
ggcgtggccgccgctgcgttgaactcgaccctaagtgccgaacagcaacgcgacctggcc
gcacggatcaagcgtggcgaagtgaaaatgctctatctggcgcccgaacgcctggtgcag
ccgcgcatgctggccttcctgcaaagcctcgaaattgccctgttcgccatcgacgaagcg
cattgcgtgtcgcaatggggccacgatttccgtcgcgaatatttgcaactgggtcagttg
gcggaactgttccccaacgttccgcgcattgccctgaccgccaccgccgacaagcgcacc
cgcgaagaaatcgttgatcgtctgcatttgcaggacgccgagcgcttcctgtcgagtttc
gaccgtcccaacattttctaccgcatcgtccccaaggagcagccgcgcaagcaattgttg
gcgttcctcgccgagcggcgcagcgatgccggcatcgtttactgcctgtcgcgcaaaaaa
gtcgacgaagtggcggtgttcctcagcgaacagggattcccggcgctgccgtaccacgcc
ggtctgcccaacgagacgcgggcccatcaccagaaacgcttcctcaacgaggaaggcctg
atcatggtcgccaccgtggcgttcggcatgggcatcgacaaacccaacgtacgttttgtc
gctcacctcgatttgccgaaatccctggaggcgtattaccaggaaaccggtcgcggcggc
cgtgacggtctgccggcagatgcgtggatggcctacggcctgcaagacgtggtgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgccacaagcgtctggagcagcacaag
ctcgacgcgatgctctcgctctgcgaagaaacccgctgccggcgccagacgctgctggcc
tacttcgacgaagacatgcccgagccgtgcggccactgcgacaactgtgtcgatggcgtg
cagacctgggacgccaccgagccggcccgtcaggcgctctcggcgatctaccgcaccggg
cagcgctacggcgtcggccatctggtggatgtgttgctgggcaaggacaacgaaaaggtc
cgcagcttcggccatcaacatctgtcggtttatggcgtcggcaaggcgatgggcgagagc
gaatggcgttcgctgttccgccagctggttgcccgtggcctcgcggacatcgacctcgaa
ggctacggcggcctgcgcctgagcgacacctgccggccgctgctcaagggtgaagtgact
ctggaactgcgccgcgacctcaagccgcaaaccactgccaaaagcagcaagagccaggcg
agccaactggttcgtggcgaagagcgcgaacagtgggaagccttgcgtgccctgcgtcgc
aagcttgccgaagaacacggcgtgccaccgtacgtcatcttccccgactcgacgttgctg
gaaatgctccgcagccaaccgacctcgctggcggaaatggccacggtcagcggcgtcggc
gcacgcaagctggagcgttacggcgaggccttcctcgaagtgctcggcggccaggtcgag
gcgccgaaagtggtggccgacgtgcgccacgaactgatcaccctggcccgtgccggcatg
acgccgctgcaaatcgccgggcagttgcaatgcacggaaaagaacgtctacaccatgctc
gccgaagccatcggcaagcagcaattgtcgcttgagcaggcgctggatctgccggaagag
ctgatgggcgaaatccaggatgcgttcctcgacggcgaaggcgagttgccgccggtcgcg
gaaattgccgcgttgtttgccggtcgtgtgccggaaggggttttgtactgtgtccgggcg
gcgctgcaatccgaattcgagatttaa
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