Pseudomonas nunensis: NK667_20845
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Entry
NK667_20845 CDS
T08997
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pnb
Pseudomonas nunensis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnb03021
]
NK667_20845 (rapA)
Transcription machinery [BR:
pnb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NK667_20845 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UTO12607
UniProt:
A0ABY5EE67
LinkDB
All DBs
Position
4753105..4755951
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKLTVQEVDDVDGLLVYHGLNAQNEVVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
ANPFEDTQLALVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEEKASAEYSLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDK
GRLSPEAHKTIHGFLGNEGEALLTAVNDGDVEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHPYPLPCPDEYLELPLGDHAELYPEVSFQAQPDANEEERWWKFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHIIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGSRLLPLLENADDGEWQALIDEARSERERLE
AELHTGRDRLLELNSGGSGEGDQLVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSGRVSF
ETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKIAPRHAERVAEAQRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRNQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagccgagctgggt
ttgggcaccgttctggcacaggacggccgcttgttgaccgtgctctatccggccactggc
gacactcgtcagtacgcgctacggaatgcgcccctcacacgtgtgcggttttccccgggt
gactcgatcactcacttcgaaggctggaaactgaccgtacaggaagtcgacgatgtcgat
ggcctgctggtctaccacggcctcaacgcgcaaaacgaagtggtgaccctgccggaaacc
caactctcgaacttcattcagttccgtctggccagcgaccgtctgttcgccgggcagatc
gatccgctggcttggttctccctgcgttatcacaccctggaacacaccagccgtcagctg
caatcttccctttggggcctgggcggcgtacgtgcgcaaccaatcgcgcaccaattgcac
atcgcccgtgaagtcgctgaccgtatcgcgccacgggttttgctggcggacgaagtgggc
ctgggtaaaaccatcgaagccggtctggtgatccatcgccaactgctgtcgggccgcgcc
aaccgcgtactgatcctggttccagagaacctgcagcatcagtggctggtggagatgcgc
cgccgcttcaacctgcaagtcgcgctgttcgacgaagaacgctttatcgaaagcgatgcc
gccaacccgttcgaagacacccagctcgcactggttgcactggaatggctggtggacgac
gagaaggcccaggacgcgctgttcgccgccggttgggacttgatggtggtcgacgaagcc
caccacctggtctggcacgaagaaaaggccagcgcggaatactcgctggtcgaacaactg
gccgaagtcattcctggcgtgttgctgctgaccgcgaccccggaacaactgggtcaggac
agccacttcgcgcgtctgcgcctgctcgacccgaaccgcttccatgacctgcacgccttc
cgcgccgaaagcgaaaactatcgcccggtggccgaagccgttcaggagttgctggataaa
ggtcgcctgtcgccagaagcgcacaagaccatccacggtttcctcggtaacgaaggcgaa
gcgctgctgaccgccgtcaacgatggcgacgtcgaagccagcgcccgtctggtgcgtgaa
ctgctcgaccgccacggcaccggccgcgtgctgttccgcaacacccgcgccgccgtgcag
ggtttcccggagcgcaaactgcacccgtacccgctgccatgcccggacgaatacctcgaa
ctgccgctgggcgatcacgccgagctgtacccggaagtcagcttccaggcccagccggac
gccaacgaagaagaacgctggtggaaattcgacccgcgcgtcgagtggctgatcgatcag
ctgaaaatgctcaagcgcaccaaagtgctggtgatctgcgcccacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgttccggcatcccggccacggtgttccacgaaggc
atgaacatcctcgaacgtgaccgcgccgccgcttacttcgccgatgaagagtttggcgcg
caagtgctgatctgctcggaaatcggcagtgaaggtcgcaacttccagttctcgcaccac
ttggtgctgttcgatctgccgtcgcacccggacctgctggagcagcgtatcggtcgcctc
gaccggatcggccagaagcacatcatcgagctgcacgtgccgtacctggaaaccagcccg
caagagcgcctgttccagtggtatcacgaagcgctgaatgcgttcctcaatacctgcccg
accggcaacgccttgcagcatcagttcggctcgcgcctgctgccgctgctggaaaacgct
gacgatggcgagtggcaagcactgatcgacgaagcgcgcagcgagcgtgaacgtctggaa
gccgagctgcacaccggtcgtgaccgtttgctggaactcaactccggtggttcgggcgaa
ggcgatcagttggtcgaggacatccttgagcaagacgatcagttcgccctgccgatctac
atggaaaccctgttcgatgcgttcggcatcgacagcgaagaccattcggaaaacgccctg
atcctcaagccgagcgaaaaaatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacttacgaccgcaaccaggcgctgtctcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaaacctggcaccgtgttgctggaactg
ctctacgtcagcgaagtggtcgccccgcgttcgctgcaactgggccgttacctgccgccg
gccgccctgcgctgcctgctcgatgccaatggcaatgacttgtcgggccgggtgtcgttc
gagaccctgaacgatcaactcgaaagcgtaccgcgtgctagcgccaacaagttcatccag
gcccagcgcgatcagttgacgccacggatcaacgccggcgaagagaagatcgccccgcgt
cacgccgagcgtgtggctgaggcgcaacgtcgcctggccgccgacaccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgcgacagcgaattggtggcc
ctgcgcaatcaacgcgagcaaggcctagccatgctcgacaaggctgcgctgcgactggaa
gcgattcgggtgttggtggcgggctaa
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