Pseudomonas nunensis: NK667_23225
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Entry
NK667_23225 CDS
T08997
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnb
Pseudomonas nunensis
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnb03016
]
NK667_23225 (truB)
Enzymes [BR:
pnb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NK667_23225 (truB)
Transfer RNA biogenesis [BR:
pnb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NK667_23225 (truB)
Prokaryotic type
NK667_23225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
BAT
Motif
Other DBs
NCBI-ProteinID:
UTO13064
LinkDB
All DBs
Position
complement(5273545..5274462)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKAYETLAQLGKTTTTADAEGEVLQERPVTVGRADVEAALPGFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSSFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ctggggttcacctccaacgcggcgttgcagaaggtccgctggttgctgaacgccgagaaa
gccgggcacaccggcagtctcgatccgctggccaccggcgtgctgccgttgtgcttcgga
gaggccaccaagttctcgcaatacctgctcgactccgacaaggcctatgaaaccctggcg
caactgggcaagaccaccaccacggcggatgccgaaggtgaagttttgcaggaacgccca
gtgaccgttggtcgcgccgatgtcgaagctgcattacccggttttcgtgggcaaatcagc
cagataccgccgatgtactcggcgctcaagcgtgatggccagccgctgtacaagctggcc
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccttcgagggtgatactgcgcgacttgcggtggattgcagcaaaggcacctatatt
cgcaccctggtggaggatatcggtgagcaactcggttgtggcgcttacgttgcagaattg
cgacgtacccaggccgggcctttcacgctggcgcagactgtcacgcttgaagagttggaa
gccgtacacgccgaaggcggcaacgaagcggtcgatcgcttcctgatgccatcggacagc
ggcctgctggattggccgctgttgcagttctcggagcacagctcgttctactggcttaac
ggccaaccggtacgagccccggatgcaccgaagttcggcatggtacgggtacaggatcac
aatggtcgcttcatcggtattggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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