Pseudomonas nunensis: NK667_23640
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Entry
NK667_23640 CDS
T08997
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NK667_23640 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_23640 (recB)
Enzymes [BR:
pnb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NK667_23640 (recB)
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NK667_23640 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_25
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UTO13139
LinkDB
All DBs
Position
complement(5358734..5362423)
Genome browser
AA seq
1229 aa
AA seq
DB search
MTTKTPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGESSGFGRELLPPQILV
VTFTDAATKELRERIRTRLAEAARFFRDEIPAPDSLIADLRDQFLPEQWSGCANRLDIAA
QWMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMQGD
ALNWVRANWGGPAALLPRVRGLFASERDSVEGKEPAELIAECLHERRTALLELKMPWRQW
ADELLAICHQGVASKSVDGRKMQARYFEPWFEKLKAWAEDESLEQLDIGTGFTRLTPDGM
AEAWKGEAPRHPGLDAMPGLKVSLDSLPTPDAAVLQHAAQWVGARFEEEKRRRAEMGFDD
MLLRLDAALQSDGGERLATLIREQFPVALIDEFQDTDPVQYRIFESIYRIEDNNPECGLF
LIGDPKQAIYAFRGADIYTYLRARQATTGRLHTLGTNFRSSHGMVNAVNHVFERAESRET
GRGAFLFREKNGDNPVPFLPVESQGRKEVLQIDGQNVPALNIWHLPAEQPLSGVVYRQQL
AAACASEITALLNGGQQGRAGFIQDGKDFRGLLPADIAILVRDGKEAQAVRGELSARGVR
SVYLSDKDSVFAAQEAHDLLTWLKACAEPDVERPLRAALACITLNLSLAELERLNQDELA
WEARVMQFRRYREIWRKQGVLPMLRRLLHDFQLPQALITRSDGERVLTNLLHLSELLQQA
AAELDGEQALIRHLSEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPFI
CSAKPVDGSRLPLHYHDATGKAQVTLKPTPELIALADDERLAEDLRLLYVALTRAQHACW
LGVTDLKRGNNNSSVLHLSALGYLLGGGAALVESAGLKRWLEDLQQDCLALSYGEMPEAT
AEHYHPPRNEATLLAPLIPKRKASENWWIASYSALRIGDSMSVGTDEAPESPQAQKLFDD
ERLDPEAPREVVTGGADIHRFPRGPNPGTFLHGLLEWAGDEGFSATPKAVEDAVGRRCNR
RGWEGWIVTLSDWLQHLLKSPLHIGGGQPPVIFEQLTQYRVEMEFWFASHKVDVLKLDEL
VRQHTHNGVARVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNWLGVDDAAYTEQAME
QSILDNRYDLQYVLYLLALHRQLKTRLPDYDYDRHVGGALYLFLRGTRAASQGVYFARPP
RELIERLDRMFQGKPELKAEPAWEQGELL
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaagacaccgttggccctggcattccctctgcgcggcagccaactgatcgag
gccagcgccggcaccggcaagaccttcactatctccgccctatatctgcgcctggtcctt
ggccacggcggcgagtcgagtggtttcgggcgtgaattgttgccgccgcaaatcctcgtc
gtgaccttcaccgatgccgccaccaaagaactgcgcgagcgtattcgcacccgtctggcc
gaagctgcgcggttcttccgggatgagattccggcgcccgatagcctgattgcagatttg
cgagaccaattccttccagagcaatggtccggttgcgcaaaccgcctggacatcgctgct
caatggatggacgaagcggccgtctcgaccatccacagttggtgtcagcgcatgctgcgc
gagcacgcgttcgacagcggcagtctgttcacccaaaccctggagaccgatcacagcgat
ctactgggcgaagtcctgcgcgattactggcggctgttctgctacccgatgcaaggcgat
gcgctgaactgggttcgcgccaattggggcggccccgcagcgttgctgccgcgagtgcgc
ggcttgttcgccagcgagcgcgatagcgttgagggcaaagagcccgccgaactcatcgcc
gagtgcctgcacgaacggcgcacggccctgcttgaactcaagatgccgtggcgccaatgg
gcagacgaattgctcgcgatctgtcatcaaggcgtggcgagcaaaagcgtcgacgggcgc
aaaatgcaggcgcgctatttcgagccttggttcgaaaagctcaaagcctgggccgaagac
gaatccctcgaacagctggacatcggcaccggattcacccggctgactcccgacggcatg
gccgaagcctggaagggtgaagcaccccgtcatcccggcctggatgcgatgcctggcctc
aaggtcagtctcgatagtttgccgacgcctgatgcggccgttctgcaacacgcggcccag
tgggttggcgcacgtttcgaagaggaaaaacggcgccgcgcggaaatgggtttcgatgac
atgttgctacgtctcgatgcagccttgcagtccgacggcggtgagcgcctggcaacgctg
attcgcgaacaattcccggtggcgttgatcgatgaattccaggacaccgacccggtgcag
taccgcatcttcgaaagcatttatcgcatcgaagacaacaaccccgagtgcggcttgttc
ctgatcggcgatccgaagcaggcgatctatgcctttcgtggcgccgacatctacacctac
ctgcgcgcccgtcaggccaccaccggccgtttgcatacgctgggcaccaacttccgttcc
agccatggcatggtcaatgcggtgaaccatgttttcgagcgtgccgagtcgcgggagacc
gggcgcggtgcgttcctctttcgcgaaaaaaatggcgataaccccgtaccgttcctgccc
gtcgagtcccaagggcgcaaagaagttttgcaaatcgatggtcagaatgttccggcgctg
aacatctggcatctgcctgccgagcagccgctgtccggcgtggtgtaccgacaacaattg
gccgctgcctgcgccagtgaaatcactgcgttgctgaacggcgggcaacaaggccgggcg
ggtttcatacaggacggcaaagacttcagaggcctgctgccggcggacatcgcaattctg
gtccgtgacggcaaagaggctcaggcagtgcgtggcgaattgtccgctcgtggtgtgcgc
agcgtttatctctcggacaaggactcggtgttcgccgcccaggaagcgcatgacctgctg
acctggctcaaggcctgcgccgagcccgacgtcgagcgtccactgcgagccgcgttggcc
tgcatcacgttgaacctctcgctggctgaactggagcgactgaatcaggacgaactggcc
tgggaagcgcgggtcatgcagttccgccggtatcgcgagatctggcgcaagcaaggcgtg
ctgccgatgctgcgacgcttgctgcacgacttccagctgccccaggcattaatcactcgc
agcgacggcgagcgtgtcttgaccaacctgttgcacctctccgaactgctgcaacaagca
gccgccgaactcgatggcgaacaagcgctgattcggcatttgtccgagcacctggcgctg
tccggccaggcgggtgaagagcaaatcctgcgcctggaaagcgacgaacaattggtcaag
gtcgtgaccattcacaagtccaagggccttgagtatccgttggtgttcctgcctttcatc
tgctcggcgaaaccggtggatggcagtcgtttgccgctgcattaccacgacgccacgggt
aaggcgcaggtgacgttgaaaccgacacccgagttgatcgccctggccgatgacgagcgt
ctggccgaggatttgcgcttgctctatgtggcactgacccgggcgcaacacgcgtgctgg
ctcggagtgaccgacctcaagcgcggcaataacaacagctcggtgctgcatttatcggca
ttgggttatctgttaggcggtggcgcggcgttggttgagtccgccggcctgaagcgttgg
ctggaagacctgcagcaggattgtctggcactcagctatggcgagatgcctgaggcgact
gccgagcattaccatccgccgcgtaacgaggcgaccttgctcgcgccgttgattcccaag
cgcaaggccagcgaaaactggtggattgcctcctatagcgccttgcgcattggcgacagc
atgagcgtgggcactgacgaagcgccggagagtccgcaagcgcaaaagctcttcgatgat
gaacgtctagatcccgaggcaccacgggaagtggtgactggcggcgcggatattcaccgc
tttccccgtggcccgaatcccggcacctttctccacggtctgctcgaatgggccggcgac
gaaggcttcagcgcgacgccgaaagccgtggaagacgcggttggccggcgctgcaatcgg
cgcggctgggaaggctggatcgttacgttgagcgactggttgcagcacttgctcaaatca
ccgttgcacattggtggcgggcagccgccagtgatctttgagcaactgacccagtaccgg
gtcgagatggagttctggttcgccagtcacaaggtcgacgtgctcaagcttgatgaactg
gtgcgccaacacacccacaacggcgtggcccgcgtggccgccgaaccggtgctgctcaat
ggcatgttcaagggcttcatcgacctgacgttcgagcacgacggtcgctactacgtcgcc
gactacaaatccaactggcttggcgttgatgacgcggcctacaccgagcaggccatggag
cagtcgatcctcgataaccgctatgacctgcaatacgtgttgtacctgttggccctgcat
cgccagctcaagacacggctgcccgactacgattacgaccggcatgtcggcggtgcgttg
tacctgttcttgcgcggcacgcgagccgccagccaaggcgtgtatttcgcccgtccgcca
cgggaattgatcgagcgtctggatcgcatgttccagggtaagccggaactcaaggctgag
cccgcctgggaacagggagaactgctatga
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