Pseudomonas nunensis: NK667_23645
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Entry
NK667_23645 CDS
T08997
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NK667_23645 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_23645 (recC)
Enzymes [BR:
pnb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NK667_23645 (recC)
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NK667_23645 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
UTO13140
LinkDB
All DBs
Position
complement(5362420..5365872)
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AA seq
1150 aa
AA seq
DB search
MPDAASLNAGFMVVQSNSLDELRSLVISVMRNYPLAPLENEIALVQSNGIAQWLKLALAE
DPEDDDMGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPVKSLLDKAPLTWRLMRLLPQL
INQPHFEPLQRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQLRNGRGE
AKALTPANCWQAELWRALLLDVGEQGMAQSRAGVHQRFIERINSLDEAPDGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRYHWADIVADKDLLRHQYKRQARKSGMPVVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYRAAFRGGRIDLFSDSQPQNMLNQL
QDDILELRPLNETREHWPAVDLQNDKSIRFHITHSAQREVEILHDQLLERFSANPDLRPR
DVIVMVPDIDSYAPHIRAVFGQLERNDPRFIPFTLADQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVEEPDLPTLHRWIEGAGIRWGMNAEQRAALGLPQELEQNS
WRFGLRRMLLGYAVGSANACEGIEPYDEIGGLDAALIGPLVALLDALEIAHQELTQPAPP
KQWGVRLQGLVQLFFKASNEHDDYLLAQLEELRETWLDTCESVGLQDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARNQLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLDG
DADDLLEAMTQEHPLQPFSARYFHEGDALFSYASEWQVLHQSNEQTTDIEILEPYIQDEP
LGLGQLQDFLRNPVRHFFSQRLKVFFEAAEVPLADEEPFVLDALQRYSLSDSLLEAALSQ
LEHSDQALEAQAIRLQNSGLLPMAGFGECLQRELIEPLPDLLQRYQQLLALWPTPLTSAL
PVNLELHGLRLEGWLSGLHQRADAGMLSITTIPNSIGSIKTRKWHRLTRPWVNHLVACAS
GLSMSTALVASDDTLLLEPLQKEAALQILGNLLLAWQAGMRQPLPIAVKTAFAWLGQTDP
IKADAAARKAYEGDGQTTDGERRESPALARQYADYDSLIADETFPGWCDALYRPLLEAPW
RSLTSEGARS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgctgcgtccctcaatgctggttttatggtggttcaaagcaacagtctggat
gaactgcgtagcctggtgatcagcgtaatgcggaactacccattggcgcccttggaaaat
gaaatagccttggtacagagcaacggcattgctcaatggctgaagctcgcactggccgaa
gaccctgaagacgatgatatgggaggctgtggcatcgcggcggcaatcgatgtgcaatta
cccggcagctttatgtggcaactctatcgcatggtcctgggccgggatgaaatcccggtc
aaatccctgctcgataaagccccgttgacctggcgtctgatgcgcctgctgccgcagtta
atcaatcagccgcatttcgaacccctgcaacgcttcctgacccatgacaccgatttgcgt
aaacgctatcaattgtccgagcgtctggcggatctgttcgaccaatatcaggtgtaccgg
gccgactggcttgaggattgggctgaaggccgacatcaattacgcaacggcagaggcgaa
gccaaggccctgaccccggcgaattgctggcaggcagagctatggcgtgcgctgctgctg
gatgtaggggaacaaggcatggcccaaagccgtgcaggcgtccatcaacggtttatcgaa
cgtatcaacagtctcgacgaagcgcctgatggattaccgtcccgagtgatcgttttcggg
atttcttcgctgcccgcccaagcactggaagcactcgccggactggctcgattcagccag
gtcttgctttgcgtccacaacccatgtcgttaccattgggctgacatcgtcgccgataaa
gacctgttgcggcaccaatataaacgccaggcccgtaaaagcgggatgccggttgtcctc
gatccgcaaacccttcaccaacacgctcatcctctattggccgcatggggcaagcagggg
cgggactacatcaacctgctcgacagctatgacgatcccggcagctatcgtgcggcattt
cgcggtggccgcatcgacctgttcagcgacagccagccacaaaacatgctcaatcagttg
caagacgacattcttgagctgcgtcctttaaacgagacccgagagcattggcctgccgtc
gatctgcaaaacgacaaatcgatccgttttcacattactcatagcgcccagcgggaagtg
gaaatccttcacgatcagttgctcgaacgcttcagcgctaacccggatttaagacctcgc
gatgtgatcgtgatggtgccggacatcgacagctacgctccgcatatccgcgcggtattc
ggccaactggaacgcaatgatccgcgctttattcccttcaccctggcagaccagggccaa
cgcggtcgtgatccgttactgatcgctgtcgaacacctgctcaagttgccggacagtcgt
ttcccggtcagcgaaattctcgacctgctggacgtccccgcactccgggcgcgctttggc
gtagaagaacctgatctgccgaccctccaccgttggatcgaaggtgccggtattcgctgg
ggcatgaatgctgaacaacgagccgccctcggtctgccgcaagagcttgagcaaaacagt
tggcgtttcggcctgcggcgcatgctgctcggttatgcggtgggcagcgccaatgcctgc
gaaggtattgagccctatgatgagatcggtgggttggacgccgcgctcattggtcctttg
gttgccctgctggatgcactggaaatcgcgcaccaggaactcacacaaccggctccgccc
aagcaatggggcgtgcggttgcaagggctggttcagctgtttttcaaggccagcaacgag
cacgacgactacttgctggctcaactcgaagaactgcgcgaaacctggctcgatacctgc
gagtccgtgggattgcaggacgagttaccgctgacagtcgtccgcgaagcgtggctggca
ggtctcgatcagggccgcttgtcccagcgcttcctggccggtgccgtcaacttctgcacc
ttgatgcccatgcgcgcgatcccattcaaactggtgtgcctgctcggtatgaatgacgga
gattatcctcgcgcccaaccgccgctggacttcgacctgatgggcagcgactaccgcccc
ggcgatcgctcccgacgcgaagatgatcgctacctcctgctggaagcgctgctgtcggca
cgcaatcaactttatatcagctgggtaggccggagcattcgcgataacagcgagcgtccg
gcatcggtactgattggccagttacgcgaccatcttgccagcggttggcgattggatggc
gacgccgatgacctgcttgaagcaatgacgcaagaacaccccttgcaacccttcagtgcc
cgctattttcacgagggcgatgcgctgttcagctacgccagcgaatggcaggtgctgcat
cagtccaacgagcaaacgactgatatcgagattctcgaaccctacattcaggacgagccg
ctaggcctgggacaattgcaggatttcctgcgcaaccccgtacgacatttcttcagccag
cggctcaaggtgttctttgaagcggctgaagtgccgttggccgatgaagagccttttgtg
ctcgacgcgctgcaacgctacagcctcagcgacagtttgcttgaggcggcattgagtcaa
ctggaacactccgatcaggcactggaagctcaagccatccgcctgcaaaacagtggcctg
ctgcccatggccggtttcggtgaatgccttcagcgcgagttgatcgaaccgttaccggat
ctgctgcaacgctatcaacaactcttggcgttatggccgacaccgctgaccagcgcgttg
ccagtgaatctggaactgcacggtttgcgtcttgaaggctggctcagtggcctgcaccaa
cgcgcagacgcgggcatgctgtcgatcaccacgatccccaacagcatcggctcgatcaag
acccgcaagtggcatcggctgacgcgaccatgggtcaatcacctagttgcctgcgccagc
ggcctgtcgatgagcaccgcgctggtcgcctccgacgacactctgctgctggaaccgttg
cagaaggaggccgcgctacaaatcctcggtaatctgctgctggcctggcaagcgggcatg
cgccaaccgttaccgatcgcagtgaaaaccgccttcgcctggctcggtcaaaccgacccg
atcaaggccgatgccgccgcgcgaaaagcctacgaaggtgacggtcagactactgacggc
gaacgtcgcgaaagcccggcactcgcccggcaatacgcggattacgacagcctgatcgcc
gatgaaacctttcccggttggtgcgacgctttgtacaggccactgcttgaagccccttgg
cgctcactgaccagcgagggcgcgcgctcatga
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