Pseudomonas nunensis: NK667_27785
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Entry
NK667_27785 CDS
T08997
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03420
Nucleotide excision repair
pnb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NK667_27785 (uvrD)
03430 Mismatch repair
NK667_27785 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_27785 (uvrD)
Enzymes [BR:
pnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NK667_27785 (uvrD)
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NK667_27785 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NK667_27785 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UTO13924
LinkDB
All DBs
Position
complement(6316015..6318198)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGLNPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACLRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSDDFPDAETIRLEQNYRSTAGILKAANALIA
NNTGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIRDHARHSDVSMWEAMRLLVANKGLTGRAAGALGAFIELIENLAAKCMDMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENAEEDEDLTPLSAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSSSSLFGGSEIPDTGFSLGQAVRHSVFGDGVILNFEGAGAQARVQVNFGEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttctgctgaactccctcaacgatgcccaacgccaggccgta
gctgcctccgtgggtcgtcagttggtcctggccggtgctggttccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccccactccatcctg
tcggtgacctttaccaacaaggccgctgcggagatgcgtcatcgcatcgagcagttgatg
gggttgaaccctgccggcatgtgggtcggcaccttccacggcctggcgcaccgcttgctg
cgggcgcactggcaggaagccgggctgagccagaccttccagattctcgacagcgacgac
cagcaacggctggtcaagcgggtgatccgcgagctgggcctggacgagcaacgctggccg
gcccgtcaggcccagtggttcatcaacgggcagaaagacgaaggtctgcgtccgcaacac
attcaggccagcggcgatttgttcctggcgaccatgcgcagcatttatgaagcctatgag
gctgcgtgcctgcgcgcgggcgtcatcgacttctccgaattgctgctgcgcgccctcgac
ctgtggcgcgatcacccgggcctgctggcgcactatcagaagcgcttccgccatattctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgaggctgctggccaag
ggtggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatctatcagtactccgacgacttcccggatgccgagactattcgt
ctggagcagaactaccgctctaccgccggcatcctcaaggctgccaacgccctgatcgcc
aataacaccgggcgcatgggcaaagagctgtggaccgacggcggcgaaggcgaagcgatc
aatctgtacgccgcgttcaacgaacacgacgaagcgcgttatgtggtggaaaccatcgaa
agcgcgctgaaaaccggcttggctcgcagcgatatcgcgattttgtaccgctctaacgcc
caatcccgcgttttggaagaagccttgctacgcgagcgcattccttaccgcatctatggc
ggccagcgcttcttcgagcgcgcggaaatcaagaacgccatggcttacctgcgcttgctg
gaaggccgtggcaacgatgcggcactcgagcgggtgatcaacgtgccggcccgtggcatc
ggcgagaaaactgtcgaagcgattcgcgaccacgcccgtcatagcgatgtgtcgatgtgg
gaagccatgcgcctgctggtagcgaacaagggcctcaccggtcgtgcggccggcgctctc
ggggcgtttatcgagctgatcgagaacctcgccgccaagtgcatggacatgccgctgcac
ctgatgacccagaccgtcatcgagcagtccggactgattgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgccgcgcgcaac
ttcgaaaacgcggaagaagacgaagacctgacgccattgtcggcgttcctcggccatgcg
tcgctggaagccggcgacacccaggccgacgagcacgaagacagcattcagttgatgacc
ctgcacagcgccaaaggcctggaattcccttacgtgttcctggtgggcatggaagaaggt
ttgttcccgcacaagatgagcctggaagaaccgggtcgtcttgaagaagaacgccgcctg
gcctacgtcggtatcacccgggccatgcagaatctggtgatgacctatgctgaaacccgt
cgcctgtacggcagcgagacttacaacaaagtgtcgcgtttcgtacgtgaagtgccgaaa
ggcctgatccaggaagtgcgcttgtccaacagcgtcagccgcccgttcggcggaggtcag
cagcagagctccagcagtttgttcggcggcagcgaaatcccggacaccggtttcagcctg
ggtcaggcggtgcggcattcggtgtttggcgacggcgtgatcctgaatttcgaaggcgcc
ggggcacaggctcgggtgcaggtgaacttcggtgaaggcagcaagtggctgatgttgggg
tatgcaaagctggaagcgatctaa
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