Pseudomonas nunensis: NK667_28105
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Entry
NK667_28105 CDS
T08997
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pnb
Pseudomonas nunensis
Pathway
pnb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NK667_28105 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnb02044
]
NK667_28105 (tssK)
Secretion system [BR:
pnb02044
]
Type VI secretion system
Imp/Vas secretion system core components
NK667_28105 (tssK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
STN1_2
Motif
Other DBs
NCBI-ProteinID:
UTO13985
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Position
6390828..6392159
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AA seq
443 aa
AA seq
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MNSHKVIWQEGMLLRPQHFQHNDRYYEHQMKTRTQLLGSYTWGFLNLDIDLQFLNMGKLV
ISQASGILPDGSLFELGGNTEPLALDVPPNTGNTPIYLALPLVTGNHIEARRPEQSDVLA
RYTAYESEVADSNAGDDSSSQVSCARPDFKLLLGEQQSDQAYVKLKICEVLDTTPDGVIS
LDPDFVPTYIQAHSSSYLLSCLKEVISMLGHRGDTIADRIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLEQVHPEELYRTLLTMLGDLATFSSDSKRPRLDSRYQHSDQGASFRKL
MEAIRQVLSMVLEQHAIELVLQARQYGIIVSPLHDHKLLGSASFVLAASANCDSEELRHR
LPAHLKVGPVERIRQLVNLHLPGIKVKPLPVAPRQIAFHSNKTYFILELSSEDLAQLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccataaagtcatttggcaggaaggcatgctgctgcgtccgcagcacttccag
cacaacgatcgctactacgaacaccagatgaagacccgcacccagttgctgggcagctac
acctggggcttcctgaacctggacatcgacttgcagttcctcaatatgggcaaactggtg
atcagccaggcctcggggattttgccggacggcagcctgttcgaactgggcggcaacacc
gagccattggccctggacgtaccgccgaacaccggcaatacgccaatctacctggcgctg
ccgctggtcacgggcaaccacatcgaagcccgtcgcccggagcaatccgacgtgctggcg
cgctacaccgcgtatgaatcggaagtcgctgactccaacgcgggcgatgattcgtccagc
caggtcagctgcgcgcgcccggacttcaaactgttgctcggcgagcagcagagcgaccag
gcctacgtgaagctgaagatctgcgaagtgctcgacaccacgccggacggcgtgatcagc
ctcgacccggacttcgtgccgacctacatccaggcgcattcctccagctatttgctgtcg
tgcctcaaggaagtgatcagcatgctcggccaccggggcgatacgatcgccgaccggatc
cgttccaacggcaaggtcggtggcgcggaagtcggcgacttcatgatgctgcaactgatc
aaccgcaccgaactgctgctgcgtcactacctcggcctggagcaggttcacccggaagag
ttgtaccgcacgctgctgaccatgctcggtgatttggcgacgttctccagcgacagcaaa
cgcccgcgcctggacagccgttatcagcacagcgatcagggcgcgagcttccgcaaactg
atggaagcgattcgtcaggtgctgtcgatggtgctcgaacagcacgccatcgaactggtg
ctgcaggcgcgtcagtacgggatcatcgtgtcgccgttgcacgaccacaaactgctgggc
tcggcctcgttcgtgctcgcggccagtgccaactgcgattccgaagaactgcgccaccgc
ttgccggcgcacctcaaggtcggcccggtggagcgcatccgccaactggtcaacctgcat
ctgcctggcatcaaggtcaaaccgttgccggtggccccgcggcagatcgcgttccactcc
aacaaaacctatttcatcctcgaactcagttccgaagacctggcacaactcgagcgctcc
ggcggcttcgcgttccatgtgtccggcgaatttgccgagcttgaactgaaattctgggcc
atcaggaactga
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