Pseudomonas nunensis: NK667_28555
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Entry
NK667_28555 CDS
T08997
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb00300
Lysine biosynthesis
pnb00470
D-Amino acid metabolism
pnb01100
Metabolic pathways
pnb01110
Biosynthesis of secondary metabolites
pnb01120
Microbial metabolism in diverse environments
pnb01230
Biosynthesis of amino acids
Module
pnb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NK667_28555 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NK667_28555 (lysA)
Enzymes [BR:
pnb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NK667_28555 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UTO14070
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Position
complement(6488156..6489403)
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYLAYADALAGVPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLGLIDRLGECGIYLRHIDLGGGV
GVRYRDEEPPLVADYIKAVRERCDGRDLTLVFEPGRYIVANAGVLLTQVEYLKHTEYKDF
AIVDAAMNDLIRPALYQAWMDVSAVRPRDTEARAYDIVGPICETGDFLAKERQLALKEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaattaccgtgacggtgagctgttcgcggaaggtgttgccctgtccgcc
atcgctgaacgctttggtacaccgacctacgtctactcccgcgcccacatcgaagcccag
tacctggcgtatgccgatgcgctggccggcgtgccgcacctggtgtgctttgcagtcaag
gccaactccaacctgggtgtactgaatgtcctggcccgtctcggcgccggtttcgacatc
gtctcccgtggcgaactggaacgcgtcctggccgctggcggcagtgccgacaagatcgtg
ttctccggtgtcggcaagacccgtgaagacatgcgtcgcgccctggaagtcggcgtgcat
tgcttcaacgtcgagtccaccgatgagctggaacgcttgcaggtggtcgccgccgagctg
ggcgttcgtgccccgatctcgttgcgcgtgaacccggacgtcgatgccggcacccacccg
tacatctccaccggtcttaaagagaacaagttcggcatcgccatcgccgacgccgaagac
gtgtacatccgcgccgcgcaactgccaaacctggaagtgctcggcgtcgattgccacatc
ggttcgcaactgaccagcctgccacccttcctcgacgccctcgatcgcctgctgggcttg
atcgatcgtcttggcgaatgcggcatttacctgcgtcacatcgacctcggtggcggcgtc
ggcgtacgttatcgcgatgaagagccgccgctggtggccgactacatcaaagctgtgcgc
gagcgctgcgacggtcgcgacctgacgctggtattcgagccgggtcgctacatcgttgcc
aatgccggcgtactgctgacccaggtcgagtacctcaagcacaccgaatacaaagacttc
gccatcgtcgatgcggccatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gacgtctccgccgtgcgcccgcgtgataccgaagctcgcgcctacgacatcgtcgggccg
atctgcgaaaccggcgatttcctggccaaggagcgtcaactggccctgaaagaaggcgac
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcggtcgtaccgccgaagtgttggtggacggtgatcaggcatttgaagtgcgtcgccgt
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtaa
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