Pseudomonas nunensis: NK667_31785
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Entry
NK667_31785 CDS
T08997
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pnb
Pseudomonas nunensis
Pathway
pnb03030
DNA replication
pnb03430
Mismatch repair
pnb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NK667_31785
03430 Mismatch repair
NK667_31785
03440 Homologous recombination
NK667_31785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnb03032
]
NK667_31785
03400 DNA repair and recombination proteins [BR:
pnb03400
]
NK667_31785
Enzymes [BR:
pnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NK667_31785
DNA replication proteins [BR:
pnb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NK667_31785
DNA repair and recombination proteins [BR:
pnb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NK667_31785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DUF1059
Motif
Other DBs
NCBI-ProteinID:
UTO14661
UniProt:
A0ABY5EFW6
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All DBs
Position
7176726..7177337
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AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPSAEQVMNEVNEFVGITPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFASLPNTGKAHRAMADAEMAANLTTHLAEQLRQQHGLRELSHD
LLVSLQKVPAAKINEHLKRHRGF
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcatagcagtcatcgactttgaaaccaccgggatctcccctagcagcagctgc
cgggccacggaaattgccgtggtgatcctcgaacagggacgcatcgtcgagcgttaccaa
agcctgatgaacgccggcgtgcgcgtaccggccttcatcgaacaactcaccggcatcagc
aacgccatgctgcgtaccgcgccctcggccgagcaggtgatgaacgaagttaacgagttc
gtcggcatcaccccgctgctggcgcacaacgccgcgttcgaccagaagttctgggatttt
gaacttggccggatcaaacgcacgcggttgcagaactttgcctgctcactgttgctggcc
cgtcggttgatgccggctgcgccaaatcacaaactcggcaccctcaccaccttcgccagt
ttgcccaacaccggcaaggctcaccgggccatggcggatgcggaaatggccgccaacctg
acgacgcatctggctgaacaactgcgccaacagcatgggctgcgcgagctgtcgcatgat
ctgctggtcagcctgcagaaagtgccggcggcgaagatcaacgagcatcttaagcgccat
cgcgggttctga
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