KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_0081
Entry
NCGM2_0081        CDS       T01974                                 
Name
(GenBank) hypothetical protein
  KO
K11891  type VI secretion system protein ImpL
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025  Biofilm formation - Pseudomonas aeruginosa
pnc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NCGM2_0081
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NCGM2_0081
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_0081
Secretion system [BR:pnc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCGM2_0081
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical RHH_1
Other DBs
NCBI-ProteinID: BAK86973
LinkDB
Position
1:complement(95453..98986)
AA seq 1177 aa
MKGFLNFFARWVVPVLGLLALSLIIWFLGPLLRLGNYEPLASATSRWVLIVLLFLVWIGF
RVLRIVQARRNAAKVMQSLAEVSAPDAASVATAEELATLKQRMDEALALLKRAKLGGSER
RNLYELPWYVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDEAVL
LDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDAERAAH
AQAIRARIQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSLNREERAQVWGMTFALDDGK
SAEGPLAVFDSEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALRECLGEFLNG
VFKPNPYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIER
LFREVAFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIASYRANQSYIAAVD
QRVDPLARGIESLSPAQRDVLAVLPQLNAVQNLAGDAPSWAEGYGLYQGDMLGEESASVY
RKLLIAVFAPRLVTRIEEQLRSGGSSDFLYEGLKAYLMLGSPDHYDADFIKAWISLDWER
NLPRDLSPEQRQALHAHLDALLERRPPSARLDQDLVEDLRRQLQQLPVAQRVYDRVKRQR
LPKDVPDFRISDAAGRDAPLVFARKSGKPLTDPLSGFFTYRGYREVFLTASLSQAGTIAE
EQWVLGRDLNDAGDAANLALDVRRLYFQDYLRQWDDLLADLTVVPITNVTQAADVLRILS
GPTSPFRKLLEAVARETDLQKGDRLVAAQVKKAADGTVDKLKQRLGSLVGQEEEQGAREQ
PQQADSDPISAHFAELNSLVSKGEGGNEPAPIDSLLEDMNALYVQVSAMAGASGDSLLGD
AKNQVAAAASRVALSAERQPPVVQGLVKNVVNSTTSSMMGSVRNQLNAAWISDVVSVYRQ
SLAGRYPIAAGSSRDATLEDFGHFFGAGGVMDSYFRQYLQPYVDTSASTWRWQPGAAQKL
GINPGVLHTFQRAAAIRDAFFRSGGMQPAVRFELKPVTMDAAISQFILDLDGQQLTYDHG
PSRPVAMQWPSANGLGVVRLTVTPPPSSGRSGLTLEGPWAWFRLLDQSDLERGNSPDRFT
LRLRIDGSSIACELRASSAFNPFKSRVVSGFSLPERL
NT seq 3534 nt   +upstreamnt  +downstreamnt
atgaaaggcttcctcaacttcttcgcgcgctgggtggtgccggtgctcggcctgctcgcc
ctgagcctgatcatctggttcctcggcccgctgctgcgcctgggcaactacgaaccgttg
gcctcggcgaccagccgctgggtgctgatcgtcctgctgttcctggtctggatcggcttc
cgcgtgctgcgcatcgtgcaggcccggcgcaacgcggcgaaggtcatgcagagtctcgcc
gaggtcagcgcgccggacgccgccagcgtcgccaccgccgaagagctggcgaccctcaag
caacgcatggacgaggccctggccctgctcaagcgggccaagctgggcggcagcgagcgg
cgcaacctgtacgagttgccctggtacgtgatcatcggcccgcccggttcgggcaagacc
accgcgctgatgaattccggcctggacttcccgctcgccgcacagatgggcgccggggcg
atccgcggggtcggcggcacgcgcaactgcgactggtggttcaccgacgaagcggtgctg
ctggacaccgccggccgctataccacccaggacagccacgcccaggtggacaaggccgcc
tggctgggcttcctcgacctactcaagacccagcgcaagcgccgccccatcgatggcgcg
ttcatcgccatcagcctttccgacctgctgctgggcagcgacgccgagcgcgccgcccat
gcccaggcgatccgcgcacgcatccaggagctgtaccagcagctcggggtgcgcttcccg
atctacgtgatgctgaccaagttcgacctggtgccgggcttcatggagttcttcgacagc
ctgaaccgcgaggaacgcgcgcaggtctgggggatgaccttcgccctcgacgacggcaag
agcgcggaaggcccgctggcggtgttcgacagcgaattcgccctgctcgaacagcgtctc
accgcgcgcctggtggaacgcctgcagcaggagcgcgacccggcgcggcgcgacctggtc
tacggcttcccgcagcaattcgccgccctgcgcgaatgcctcggcgagttcctcaacggc
gtgttcaagcccaacccctacgaggaacgcccgctgttgcgcggcctgtacttcaccagc
ggaacccaggaaggcagtccgatcgaccgcctgatcggcagcatggcgcagtcgatgaac
ctcgaccgccagcacctggcgcggcagaccggaaccgggcgcagctacttcatcgagcgg
ctgttccgcgaagtggcgttcggcgaacgcggcctggtcggcaccaacccgaaggtcgag
cgccgccgcaagtggctgaccatcggcgcgctgagcgccaccgcgctggtggtgctggcg
gtgacggcggtatggatcgccagctaccgcgccaaccagagctacatcgccgcggtcgac
cagcgcgtcgacccgctggcgcgcggcatcgagtcgctgagcccggcccagcgcgacgtc
ctggccgtactgccacagctcaacgcggtgcagaatctcgccggcgacgcgccgagctgg
gccgaaggctacgggctgtaccagggcgacatgctcggcgaggagtccgccagcgtctac
cgcaagctgctgatcgcggtgttcgccccgcgcctggtgacccgcatcgaggaacagttg
cgctccggcggcagcagcgatttcctctacgagggcctgaaggcctacctgatgctcggc
agcccggaccattacgacgccgacttcatcaaggcctggatcagcctcgactgggaacgc
aacctgccgcgcgacctctcgccggaacagcgccaggcgctgcacgcgcacctcgacgcg
ttgctcgaacgacggccgccgtcggcgcgcctggaccaggacctggtcgaggacctgcgc
cgccagttgcagcaactgccggtggcgcagcgggtctacgaccgggtcaagcggcagagg
ctgcccaaggacgtgcccgacttccgcatcagcgacgccgccggccgcgacgcgccgctg
gtgttcgcgcgcaagagcggcaagccgctcaccgacccgctcagcggcttcttcacctac
cgcggctatcgcgaggtgttcctcaccgccagcctcagccaggccggcaccatcgccgag
gaacagtgggtgctcgggcgcgacctgaacgatgccggcgatgccgccaacctggccctc
gacgtgcgtcgcctgtacttccaggactacctgcggcaatgggacgacctgctcgccgac
ctcaccgtggtgccgatcaccaacgtcacccaggccgccgacgtgctgcgcattctctcc
gggccgacctcgccgttccgcaagctgctcgaggcggtggcccgcgagaccgacctgcag
aagggcgaccggctggtcgccgcgcaagtgaagaaggccgccgacggcaccgtggacaag
ctcaagcagcgcctcggctcgctggtcggccaggaggaggagcaaggcgcccgcgaacag
ccgcagcaggccgacagcgacccgatcagcgcccacttcgccgaactcaacagcctggtc
agcaagggcgagggcggcaacgagccggcgccgatcgacagcctgctggaggacatgaac
gcgctctacgtacaggtcagcgccatggccggagccagcggcgactcgctgctcggcgac
gccaagaaccaggtggcagccgccgcctcgcgcgttgccctcagcgccgagcgccagccg
ccggtggtccagggactggtgaagaacgtggtcaactccaccaccagcagcatgatgggc
agcgtgcgcaaccagctcaacgcggcctggatcagcgacgtggtcagcgtctaccggcag
tccctggccgggcgctacccgatcgccgccggcagctcgcgcgacgccaccctggaagac
ttcggccacttcttcggtgccggtggggtgatggacagctacttccgccagtacctgcaa
ccctacgtcgacacctccgccagcacctggcgctggcagcccggcgcggcgcagaagctc
ggcatcaaccccggcgtgctgcacaccttccagcgcgcggcagcgatccgcgacgccttc
ttccgctccggcggcatgcagccggcggtgcgcttcgaactcaagccggtgaccatggac
gcggcgatcagccagttcatcctcgacctcgacggccagcagctgacctacgaccacggc
cccagccgcccggtggcgatgcagtggccgagcgccaacggcctcggcgtggtccgcctg
acggtgacgccgccgcccagcagcggccgttccggcctgaccctggagggcccctgggcc
tggttccgcctgctcgaccagtcggacctggaacgcggcaactcgccggaccgcttcacc
ctgcggctgcgcatcgacggctccagcatcgcctgcgagctgcgcgccagcagcgccttc
aaccccttcaagagccgggtcgtgtccggcttcagcctcccggagcgcctttga

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