Pseudomonas aeruginosa NCGM2.S1: NCGM2_0087
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Entry
NCGM2_0087 CDS
T01974
Name
(GenBank) hypothetical protein
KO
K11901
type VI secretion system protein ImpB
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCGM2_0087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnc02044
]
NCGM2_0087
Secretion system [BR:
pnc02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCGM2_0087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Herpes_UL69
Motif
Other DBs
NCBI-ProteinID:
BAK86979
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All DBs
Position
1:105212..105730
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AA seq
172 aa
AA seq
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MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADR
KFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLN
KLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcactaccagcagtcagaagttcatcgccaggaaccgggcgccacgcgtgcag
atcgagtacgacgtggagctgtacggtgccgagaagaaggtccagctgcccttcgtcatg
ggcgtcatggccgacctcgccggcaagcccgccgaaccccaggcggcggtcgccgaccgc
aagttcctggagatcgacgtggacaacttcgatgcccggctgaaggcgatgaagccgcgg
gtggccttcaacgtaccgaacgtgctgaccggcgaaggcaacctgagcctggacatcacc
ttcgagagcatggacgacttcagccccgccgcggtggcgcgcaaggtcgattcgctgaac
aagctgctcgaggcgcgtacccaactggccaacctgctgacctacatggacggcaagacc
ggcgccgaggaaatgatcatgaaggcgatcaaggacccggccctgcttcaggccctggcc
agcgcgccgaagcccaaagacgacgagccgcaggcgtaa
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