KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_0089
Entry
NCGM2_0089        CDS       T01974                                 
Name
(GenBank) hypothetical protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025  Biofilm formation - Pseudomonas aeruginosa
pnc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NCGM2_0089
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NCGM2_0089
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_0089
Secretion system [BR:pnc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCGM2_0089
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: BAK86981
LinkDB
Position
1:107315..107803
AA seq 162 aa
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQSGSMHMGGGGGAGKVNVQDLSFTK
YIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDR
LTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
NT seq 489 nt   +upstreamnt  +downstreamnt
atggctgttgatatgttcatcaagatcggcgacgtcaagggtgagtccaaggacaagact
cacgccgaggaaatcgacgtgctggcatggagctggggcatgtcccagtccgggtcgatg
cacatgggcggtggcggcggcgccggcaaggtcaacgtgcaggacctgtcgttcaccaag
tacatcgacaagtccacgcccaacctgatgatggcctgctccagcggcaagcactatccg
caggcgaagctgaccatccgcaaggccggcggcgagaaccaggtcgagtacctgatcatc
accctgaaggaagtcctggtgtcctcggtgagcaccggcggcagcggtggcgaggatcgc
ctgaccgagaacgtgaccctgaacttcgcccaggtccaggtcgactaccagccgcagaag
gcggatggcgcgaaggacggcggtccggtcaagtacggctggaacatccgccagaacgtg
caggcctga

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