KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_0100
Entry
NCGM2_0100        CDS       T01974                                 
Name
(GenBank) hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NCGM2_0100
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_0100
Secretion system [BR:pnc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCGM2_0100
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Gp5_C Phage_base_V DUF6484 DUF2345 Dev_Cell_Death
Other DBs
NCBI-ProteinID: BAK86992
LinkDB
Position
1:119593..121818
AA seq 741 aa
MALAQQTRLVRVDSPLGAEVLQLQRMEGREELGRPFAYELELISENPDLPLDGLLGKPAS
LALELHDGSRRHFHGIVAACSQGSGNGQFASYQVTLRPWLWLLTRTSDCRIFQNQKVPDI
IKQVFRDLGFSDFEDALSRSYREWEYCVQYRETSFDFVSRLMEQEGIYYWFRHERNRHIL
VLSDAYGAHQSPPNYASVPYYPPTLEQRERDHFYDWHMAREVQSGSLSLNDYDFQRPGAR
LEVRSNIARSHAAADYPLYDYPGEYVQSQDGEQYARTRIEALQARYERVRLRGRARGLGS
GHLFKLSGYPREDQNREYLVVGAEYRVVQELYETGGGGVGAQFESELDCIDAGQAYRPLP
TTPLPIVRGPQTAVVVGPKGEEIWTDQYGRVKVHFHWDRHDQSNENSSCWMRVSQAWAGK
NWGSVQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYELPANATQSGTKSRSSKGG
TPANFNEIRMEDKKGAEQLFIHAEKNQDIEVENDESHWVGHDRTKTIDHDETVHVKHDRT
ETVDNNETITIGVDRTEKVGNNEKISIGANRTEDVGSNETISIGVDRTEKVGSNEKISIG
ANRTEDVGNDETISIGANRSESVGNNETISIGADRSESVGANETIDIGGNQSTSIGKNES
RSVGQGRDTSVGKDDSLDVGKSFTLNAGDSITLVTGAASIRMKKDGSIVISGKNITIDGS
GAINVKADKNVVVKGRKILQN
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggcacttgcgcaacagacccgcctggtccgggtcgacagtccgctcggcgcggaggtc
ctgcaattgcagcgaatggagggtcgcgaagagctcggccggccgttcgcctacgagctg
gaactgatctcggaaaaccccgacctgccactcgacgggctgctgggcaagccggccagc
ctggcgctggaactgcacgacggcagccggcggcatttccacggcatcgtcgccgcctgc
agccagggctccggcaacggccagttcgccagctaccaggtcaccctgcgcccctggctg
tggctgctgacgcgcacctccgactgccgcatcttccagaaccagaaggtcccggacatc
atcaagcaggtgttccgcgacctcggcttctccgacttcgaggacgccctgagccgctcc
taccgcgagtgggaatactgcgtgcagtaccgcgagaccagtttcgacttcgtcagccgg
ctgatggagcaggaaggcatctactactggttccgccacgagcggaatcggcacatcctg
gtgctctccgacgcctatggcgcgcaccagagcccgccgaactacgccagcgtgccctac
tacccgccgaccctggagcagcgcgagcgcgaccatttctacgactggcacatggcgcgc
gaggtgcagtccggctcactgagcctcaacgactacgacttccagcgtcccggcgcgcgc
ctggaggtgcgttcgaacatcgcccgctcgcacgcggcggccgactacccgctgtacgac
taccccggcgaatacgtgcagagccaggacggcgagcagtacgcgcggacccgtatcgaa
gccttgcaggcgcgctacgaacgggtgcgcctgcgcggccgcgcccgcggcctgggttcg
ggccacctgttcaagctcagcggctacccgcgcgaggaccagaaccgcgagtacctggtg
gtcggcgccgagtaccgggtggtccaggaactctacgagaccggcggcggcggggtgggc
gcgcagttcgaaagcgagctggactgcatcgatgccggccaggcctaccgccccttgccg
accactccgctgccgatcgtccgtggcccgcagaccgcggtggtggtcgggcccaagggc
gaggagatctggaccgaccagtatggccgggtcaaggtgcatttccactgggaccgccac
gaccagtccaacgagaacagctcctgctggatgcgcgtctcgcaggcctgggccgggaag
aactggggctcggtgcagatcccgcgaatcggccaggaagtgatcgtcagcttcctcgaa
ggcgacccggaccggccgatcatcaccgggcgggtctacaacgccgagcagacggtgccc
tacgagctgccggcgaacgccacccagagcggcaccaagagccgttcgagcaagggcgga
acgccggccaacttcaacgagatccgcatggaggacaagaagggcgccgagcagttgttc
atccatgccgagaagaaccaggacatcgaggtcgagaacgacgagagccactgggtcggc
cacgaccggaccaagaccatcgaccacgacgagacggtgcatgtgaagcacgatcgcacc
gagaccgtggacaacaacgagaccataaccatcggcgtcgaccgcaccgagaaggtcggc
aacaacgagaagatcagtatcggcgcgaaccgcaccgaggacgtcggcagcaacgagacc
atcagcatcggcgtcgaccgcaccgagaaggtcggcagcaacgagaagatcagcatcggt
gccaatcgcaccgaggacgtcggcaacgacgagaccatcagcatcggcgcgaaccgtagc
gagtcggtgggcaacaacgagacgatcagcatcggcgccgaccgcagcgagtcggtgggc
gccaacgagaccatcgacataggcggcaaccagagcaccagcatcggcaagaacgagtcg
cgcagcgtcggccagggccgcgatacctcggtgggcaaggacgatagcctggacgtgggc
aagagcttcacgctcaacgccggcgactcgatcaccctggtcaccggtgccgccagcatc
cgcatgaagaaggacggcagcatcgtcatcagcggcaagaacatcaccatcgacggatcc
ggggcgatcaacgtcaaggccgacaagaacgtggtggtgaagggacgcaagatcctccag
aactga

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