Pseudomonas aeruginosa NCGM2.S1: NCGM2_0197
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Entry
NCGM2_0197 CDS
T01974
Name
(GenBank) putative porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc01501
beta-Lactam resistance
pnc02020
Two-component system
Module
pnc_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCGM2_0197
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCGM2_0197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnc02000
]
NCGM2_0197
01504 Antimicrobial resistance genes [BR:
pnc01504
]
NCGM2_0197
Transporters [BR:
pnc02000
]
Other transporters
Pores ion channels [TC:
1
]
NCGM2_0197
Antimicrobial resistance genes [BR:
pnc01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
NCGM2_0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
BAK87089
LinkDB
All DBs
Position
1:complement(220733..222091)
Genome browser
AA seq
452 aa
AA seq
DB search
MQNLRRAVFAGLVAGTLSEGAAATAGDGGFVEDSELQFLARTYYFNRDYRDSPNNAGRNR
FKPRSERNGYREETTQGLRLQFASGYTPGSLGFGLDAHAMLGLQLDSGGGRTGTGNLPVG
ADGHPDHRYGKVGGALRLRHGETRLKYGQTTTSAPVFAASSNRTLAGMAYGLLLEDRSFD
GLLLEGGRFTAASGPGESKVRGDISTVYGRLGAYPVRLDAVGFLGGQWQATERLQLSLYA
SRFDDIWQQAYFGASHRQPLGGERALRVDLDAYRTRDSGQSRFGRIDTLASSLALGYEQG
PQRITLAYQRVHGEQPFDYMAFGDGRSSAYMVLANSVGYSDFNGPGERSWQLRYDLDLGA
LGLPGLSLHALHARGRAGASASSAAESIYAGLYGRDGRHRESDLGFAYRVKAGPLAGLAL
RASQAWHRGNASYLDGDIDETRLVVDYSRSIW
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatctcagacgcgctgtattcgccggcctggtcgccggcacgctttccgaaggg
gcggccgcgacggccggggatgggggcttcgtcgaggacagcgaactgcagttcctcgcc
cgcacctactacttcaaccgcgactaccgcgacagcccgaacaacgccgggcgcaaccgc
ttcaagcccaggagcgagcgcaacggctaccgcgaggaaaccacccagggcctgcgcctc
cagttcgcctccggctacacgccgggcagcctcggcttcggcctcgacgcccatgccatg
ctcggcctgcaactggacagcggcggcggccgcaccggcaccggcaacctgccggtcggc
gccgacggccatcccgaccatcgctacggcaaggtcggcggcgccctcaggctacgccac
ggcgaaacccgcctgaagtacggccagaccaccaccagcgcgccggtgttcgccgccagc
agcaaccgcacgctggccggcatggcctacggcctgctgctggaggatcgctcgttcgac
gggctgctgctcgagggcgggcgcttcaccgccgcctccggccccggcgaatccaaggtc
cgtggcgacatcagcaccgtctacggacgcctcggcgcctatccggtgcgcctcgacgcg
gtcggcttcctcggcggtcaatggcaggccacggagcggctgcaactgtcgctctacgcc
tcgcgcttcgacgacatctggcagcaggcctatttcggcgccagccatcgccagccgctg
ggcggggagcgcgcgctgcgggtcgacctcgacgcctaccgcacccgcgatagcggccag
agccgcttcggccgcatcgacaccctggccagctccctggccctgggctacgaacagggg
ccgcagcgcatcaccctggcctaccagcgtgtccatggcgagcagccgttcgactacatg
gccttcggcgacgggcgctccagcgcgtacatggtactggccaactcggtgggctactcc
gacttcaacggaccgggcgagcgttcctggcaattacgctatgacctggacctcggcgcg
ctcggcctgcctgggctcagcctgcatgcgctgcatgcccgcggccgtgccggggccagc
gccagcagtgccgccgagagcatctacgccggactctacgggcgtgacgggcggcaccgg
gaaagcgacctcggcttcgcctatcgggtcaaggcgggccccctcgccggcctcgcgctg
cgcgcctcgcaggcctggcaccggggcaacgcgagctatctcgacggcgacatcgacgaa
acccggctggtcgtcgattactcccgctcgatctggtga
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