Pseudomonas aeruginosa NCGM2.S1: NCGM2_2560 Help Entry NCGM2_2560        CDS       T01974                                  Name (GenBank) putative ClpA/B-type protease   KO K11907   type VI secretion system protein VasG Organism pnc  Pseudomonas aeruginosa NCGM2.S1 Pathway pnc02025   Biofilm formation - Pseudomonas aeruginosa pnc03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:pnc00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     NCGM2_2560  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     NCGM2_2560  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:pnc02044]     NCGM2_2560 Secretion system [BR:pnc02044]  Type VI secretion system   Imp/Vas secretion system core components    NCGM2_2560 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 AAA_16 Clp_N AAA_7 TniB NACHT nSTAND3 Sigma54_activat NBD_SMAX1 AAA_30 AAA_25 AAA_24 Hpr_kinase_C T2SSE Motif Other DBs NCBI-ProteinID:  BAK89418 LinkDB All DBs Position 1:2742746..2745373 Genome browser AA seq 875 aa AA seqDB search MINVDLQQLIQALDADTRRDLEGSAERCVARGGNKVLVEDLLLGLLERPQGLLARALQDA AVDAGELNAALQARGEHSASRNPVFAPELVQWLQDALLLANLELGRSQIDQAALILALLR NPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPGGGESLLQRFTHNLTQQARDG KLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALRDV ELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAAPRPTILFIDEAHTLIGAGGQAGGSDA ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLAR VYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLERL RGELAEGERQRQALRRDAEAGLPIDHDALQALEERLAQAESERHVQEDQWSRQRELAERL LALRQQLARAREANREEQGSEADAEAFPADEHGGVEALEKALHETRQALADAQAQGRLVS FEVCPRLVAEVIGAWTGVPVEQLAREHNAKVMGFADDLRARIRGQEQAVSALDRAMRATA AGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHTVSRLIG APPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVLNLFYQIFDKGVANDGEGREID FRNTLILMTSNLASEHIAALCQDGARPSAELLEETIRPALSRHFKPALLARMRVVPYYPV GGPVLRELIEIKLERLGERLARRQLAFDYSQALVDHLAERCTQSDSGARLIDHLLDTHLL PLVADRLLEAMARDERLERVHATLGEHGRVLCEFA NT seq 2628 nt NT seq  +upstreamnt  +downstreamnt atgatcaacgtagacctgcaacaactgattcaggcgctggatgccgacacccggcgcgac ctcgaaggctcggccgagcgctgcgtagcccgtggcggcaacaaggtactggtggaggac ctgttgctgggcctgctggagcgtccccagggactgctggcgcgcgccctgcaggatgcc gcggtggacgccggcgaactcaacgccgcgttgcaagcgcggggcgagcacagcgcctcg cgcaatccggtgttcgcgcccgagctggtgcagtggctgcaggatgcgctgttgctggcc aacctcgaactgggccgtagccagatcgaccaggcggcattgatcctggccctgctacgc aacccgttgcgctatgccggcagccgctaccagccgctgctggcgcggctcgacatcgag cggttgaaggatttcgcgctctcgcagccgctggagggcgcgcccagcggcaagccgggc ggcggcgagtccctgttgcagcgtttcacccacaaccttacccagcaggcgcgcgacggc aagctcgatccggtgctctgtcgcgacggggctattcgccagatggtcgacatcctggcc cgtcggcggaaaaacaaccccatcgtggtcggcgaggctggcgtcggcaagaccgccatc gtcgaaggcctggcctcgcggatcgccgcaggggaagtgccgccggcgctgagggacgtc gagctgttgtccctcgacatgggcctgttgcaggccggtgccagcgtgaagggcgagttc gagcggcgccttaaaggcgtcatcgacgaagtgaaggcagcgcccaggccgaccatcctg ttcatcgacgaggcccatacgctgatcggcgcgggcggtcaggccggcggctcggatgcc gccaacctgctcaagccggccctggcacgtggcgagttgcgcaccatcgcggcgacgacc tgggccgaatacaagaagtatttcgagaaggacccggcgctggcccggcgcttccagccc gtgcagttgcatgagccgagcgttgccgaggcggtgacgatcctgcgtggcctggcccgg gtttacgaggaaagccacggtatctacctgcgcgacgacgcggtggtggccgccgccgaa ctgtccgcccgctacctggcgggtcgccagttgccggacaaggccgtcgacgtcctcgac accgcctgtgcgcgggtgcgcatcagcctggcggcggcgccggagagcctcgagcgcctg cgcggcgagctggccgaaggcgagcgccagcgccaggccctgcgccgcgatgccgaggca ggcctgccgatcgaccacgatgccctgcaggcgctggaggagcgcctggcccaggcggaa agcgagcggcacgtacaggaggaccagtggagccgccagcgcgaactcgccgagcgcctg ctcgccctgcgccagcaattggccagggcccgcgaggcgaaccgggaagagcagggcagc gaggcggacgcggaggctttcccggccgacgagcatggcggtgtcgaagccttggaaaag gcccttcacgaaacccgccaggcactcgccgatgcccaggcccaggggcggctggtcagc ttcgaggtctgcccgcgcctggttgccgaggtgatcggcgcctggaccggcgtaccggtg gaacaactggcgcgggaacacaacgccaaggtgatggggttcgctgacgacctgcgggcg cggatccgtggccaggaacaggcggtcagcgccctggaccgcgcgatgcgcgccaccgcg gccgggctgaacaagcccgatgcgccggtcggcgtgttcctgctggtgggcccgagcggg gtgggcaagaccgagaccgcgctggcgctggccgacctgctgtatggcggcgagcgtttc atcaccactatcaacatgtccgagttccaggagaagcacaccgtctcgcgcctgatcggc gcgccgcccggctatgtcggctatggcgagggtggcatgctcaccgaggcagtacgccag aagccctattcggtgatattgctggacgaggtggagaaggccgatccggacgtgctcaac ctgttctaccagatcttcgacaagggcgtggccaacgatggcgaagggcgcgagatcgat ttccgcaataccttgatcctgatgacctccaacctcgccagcgagcacatcgccgcgctt tgccaggacggcgcgcgaccttccgccgaactcctggaggaaaccatccggccggcgctc agccggcatttcaagccggcgctgctggcgcgcatgcgcgtggtgccttactacccggtg ggcggcccggtactgcgcgagctgatcgagatcaagctggaacgcctcggcgagcgtctg gcccgccgtcagctggctttcgactacagccaggcgctggtggatcacctggccgagcgt tgcacccagagcgacagcggcgcacggttgatcgaccacctgctggacacgcacctgctg ccgctggtggccgaccgtttgctggaagcgatggcgcgcgacgagcgtctcgagcgggtc catgcgacgctgggcgagcacggccgcgtgctctgcgagttcgcctga

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